Corynebacterium felinum: CFELI_13530
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Entry
CFELI_13530 CDS
T09308
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
cfeu
Corynebacterium felinum
Pathway
cfeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFELI_13530 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfeu03400
]
CFELI_13530 (pdg)
Enzymes [BR:
cfeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFELI_13530 (pdg)
DNA repair and recombination proteins [BR:
cfeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFELI_13530 (pdg)
Prokaryotic type
CFELI_13530 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WJY96285
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All DBs
Position
complement(3051377..3052150)
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AA seq
257 aa
AA seq
DB search
MKNTQLARVRRARKLARELTRGYPEAHCELDFTTPLELLVATVLSAQCTDVRVNQVTPAL
FEAYPNALAYANADIEHLQEMIRPTGFFRAKASNLIGLGQLLISDYGGEVPQAIEDLVRL
PGVGRKTAHVVRGNAFGYPSITIDTHFGRLARRFGLTDSTDPVKVEHEIAAMLPKKEWTL
FGHRIIFHGRRICHSRKPACGICYLAPLCPSYGEGETNPAKAMDMIKAQDDERQHLISLW
EQLNPPEPTQPANSPKQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacgcagctggcacgcgtgcgtcgcgcacgaaagctcgcacgcgaactcaca
cgcggctacccagaagcacactgcgagctcgacttcaccacgccacttgagcttctcgtc
gccaccgttttgtccgcacaatgcacagatgtgcgcgtcaatcaggtcacccccgcgctt
ttcgaggcctacccaaacgccctcgcctacgcgaatgcggatatcgagcatctccaagaa
atgatccgacccactggctttttccgcgccaaagccagcaacctcattgggctcggacag
ctactcatctccgattacgggggagaagtacctcaagccatcgaagacctcgtgcgccta
ccaggggtggggcgcaaaaccgcacacgtcgtgcgcggcaacgccttcggataccccagc
atcaccatagacacccacttcggacgattagcccgccgattcggactaaccgacagcacc
gaccccgtgaaagtcgaacacgaaatcgccgccatgctgccgaaaaaagaatggacacta
ttcggccaccgcattatcttccacggccgccgcatctgccacagccgcaaacccgcctgc
ggcatctgctacctcgcacccctatgccccagttatggggaaggagaaaccaaccccgcc
aaagcaatggacatgatcaaagcacaagacgatgaacgccagcacctcatcagcttgtgg
gaacaactcaacccacccgaacccacacaacctgcgaatagcccaaaacaatga
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