Chitinophaga filiformis: MYF79_12720
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Entry
MYF79_12720 CDS
T08225
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cfil
Chitinophaga filiformis
Pathway
cfil01501
beta-Lactam resistance
cfil01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cfil00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MYF79_12720
01503 Cationic antimicrobial peptide (CAMP) resistance
MYF79_12720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfil03036
]
MYF79_12720
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfil02000
]
MYF79_12720
01504 Antimicrobial resistance genes [BR:
cfil01504
]
MYF79_12720
Chromosome and associated proteins [BR:
cfil03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
MYF79_12720
Transporters [BR:
cfil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
MYF79_12720
Antimicrobial resistance genes [BR:
cfil01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MYF79_12720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
BSH_CusB
Biotin_lipoyl
BSH_YknX
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
UPK72148
UniProt:
A0ABY4I913
LinkDB
All DBs
Position
complement(3166560..3167687)
Genome browser
AA seq
375 aa
AA seq
DB search
MNSLKALAITIICSLPATMLLSSCSHTEGKSETKEAAAPEEAAVSALSLQKGKLSSSLQI
PGELIAYQQVDIYAKVSSFVRKLHVDVGAEVSTGQLLATMEAPEISSQLAGAESRLKAQE
AIYLASKANYDRLYNTSLTPGTVSKNDLDIALARQNADKAQLDAARASYREISDTRNYLE
IRAPFSGVISARNVSAGAYVGPTGKGSEFPLFTLQEQKKLRLVISVPEAYTSYLANNSEV
NFNVKAFTGKSFTAKVNRLSGALDSRLRSQRIEMDVINNDKKLLPGMIAEVNIPMNSADS
AFLVPKTAVVNSTVNVFVVKVVNGKAERVQVQTGREADGKIEIYGTDLNEGDTIVTAATE
ELRDGADLKHVKIGK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtctaaaagcacttgctatcacgataatatgcagtttacctgctacgatgctg
ctcagcagctgcagccatacggaaggtaaatcagaaacaaaggaagccgctgcgccagag
gaggctgccgtatctgccctgtccctgcagaaaggtaaattgtcttcctcattacagata
cccggtgagctcattgcctaccagcaggtggacatctatgcgaaggtgagcagctttgta
agaaagctgcatgtggatgtaggggctgaagtgagcaccggccagctgctggccactatg
gaagcacctgagatcagttcccagctggctggtgcagaatccaggttaaaggcacaggaa
gctatatacctggccagcaaagcgaactacgaccgtttgtacaataccagcctgacgccg
ggcaccgtgtctaagaatgatcttgacatagcgctggcccgccagaacgcagataaagca
caactggatgccgccagggcatcttacagggagatcagcgataccaggaactacctggag
atcagagcgccattttcaggcgttataagcgcaagaaatgtgagtgcgggcgcctatgtc
ggtccgaccgggaaaggctctgaattccccttatttaccctccaggaacaaaagaaactg
cgtcttgtgatctccgttccggaagcatataccagttacctggccaacaacagtgaggtc
aatttcaatgtgaaggcttttaccggtaaatcattcaccgcgaaggtaaaccgtctttcc
ggggccctggacagcagactgcgttcacagcgtatcgaaatggatgtgattaacaatgat
aaaaagctgcttcccggcatgatcgcagaagtgaacattcccatgaacagtgcagacagc
gcgttcctcgtaccaaagacggcggttgttaattctactgtgaatgtatttgtggtgaag
gttgtaaatggtaaggcggaaagggtacaggtacagaccggacgcgaagcagacggaaaa
attgaaatatatggaactgatctcaacgagggcgacaccatcgtaactgccgccacggaa
gagttaagagacggcgcagaccttaagcacgttaaaataggcaagtaa
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