Cytobacillus firmus: NAF01_07575
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Entry
NAF01_07575 CDS
T08260
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
cfir
Cytobacillus firmus
Pathway
cfir00300
Lysine biosynthesis
cfir00550
Peptidoglycan biosynthesis
cfir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NAF01_07575
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NAF01_07575
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
NAF01_07575
Enzymes [BR:
cfir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NAF01_07575
Peptidoglycan biosynthesis and degradation proteins [BR:
cfir01011
]
Precursor biosynthesis
Amino acid ligase
NAF01_07575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Corona_6B_7B
YqeC
Motif
Other DBs
NCBI-ProteinID:
URT72293
LinkDB
All DBs
Position
1446438..1447898
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AA seq
486 aa
AA seq
DB search
MKLSQVINCLKDSGEMGVLTGDPDITGIEMDSRKVGKGSLFVAIKGFQADGHDFIGQAVE
NGAAAVVGEEAIELNVPYIKVTDSRTSLGKLANCFYDRPSRKHKIIGITGTNGKTTTAYI
LKHILETAGRTCSLLGTVSNIINNKEYKTCNTTPDALQIQKMLSKSHDEFVVMEISSHAL
EQSRTEGLELDYGLFTNLAHDHLDYHDSMDQYFYDKKKIFTLLKEDGKGVVNLYNSWGEK
MAEHLQNEKIPLIMLGDEKCCSIKDTAINGKTVFILEVRGKSFEIEFPLPGHHNVYNAAM
AFLTGIDLGIDPKDMIKALASFPGIPGRFEMIIHPSGAKFVVDYAHTVDAFEYCLETAKQ
QGAERIFQIYGFRGGRDQSKRVDMIKVSAKYCHEFYLTADDLNDECENEMLSQLISLNKE
YGDGKGEVIPDRTLAIRKAWAEAKENDWIFITGKGPEAYQQSFALPADNDLETLKLLKTG
RKQAVL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatcccaggttattaattgcctaaaggatagcggggagatgggtgtacttaca
ggcgatcctgatattacagggatcgaaatggattcacgcaaagtggggaaaggaagcctt
tttgttgcaattaaaggttttcaggcagacggacatgatttcattggacaagctgttgaa
aatggtgcggctgccgtagtgggtgaggaagcaattgagttaaatgtgccttacataaaa
gtaacggatagcagaaccagtctggggaaactggcgaactgcttctatgatcgcccatca
agaaagcataaaataataggtattacaggaactaatgggaaaacgaccactgcctatatt
ttaaagcatatactggagactgcaggcaggacctgctccctcttgggtactgtatcaaac
attattaataacaaggaatataagacctgcaacaccacaccggatgccctgcagattcaa
aaaatgctgagtaaaagccatgatgagtttgtagttatggagatttcttctcatgcgctg
gaacagtcaagaactgaaggtctggaattagactatggactatttactaatctggctcat
gaccatctggattatcatgacagtatggatcagtatttttatgataaaaagaagatcttt
accttgttaaaagaagacggtaaaggagttgtcaatctttataactcatggggagaaaaa
atggcagagcatctgcaaaatgaaaaaattcctttgattatgctgggtgatgagaagtgc
tgttcaataaaagacactgctataaatgggaagactgtttttattctcgaggtgagaggg
aaatcgtttgaaattgaatttcctcttccgggccaccataacgtttataatgcagcaatg
gcttttttgacaggtattgatttggggatagacccgaaagatatgattaaagctttggct
tcatttccgggtatacctggccgttttgaaatgattattcatccatcaggagctaaattt
gtcgtggattatgctcatacagtggatgcgtttgaatattgtctggaaacagcgaagcag
cagggggctgaaagaatctttcaaatttatggattccggggcggaagagatcaatcaaaa
cgtgtggatatgattaaagtttcggcaaaatactgccatgaattttatttgaccgctgat
gacctcaacgatgaatgtgaaaatgaaatgttaagccaattaatttctctgaataaagaa
tatggagacggtaagggtgaagtgatccccgaccggacattggctatccggaaagcttgg
gctgaagcaaaagagaatgattggatctttattaccggaaaggggcctgaagcttatcaa
cagtcatttgctttgccggcagataatgatttggaaaccttaaagctgctgaaaaccgga
agaaaacaggcagtcttataa
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