Colletotrichum fioriniae: CFIO01_10547
Help
Entry
CFIO01_10547 CDS
T04796
Name
(GenBank) SNF2 family domain-containing protein
KO
K15083
DNA repair protein RAD16
Organism
cfj
Colletotrichum fioriniae
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfj03400
]
CFIO01_10547
DNA repair and recombination proteins [BR:
cfj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
CFIO01_10547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
zf-C3HC4
DEAD
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
TRAF3_RING
Motif
Other DBs
NCBI-ProteinID:
EXF81063
UniProt:
A0A010S8N7
LinkDB
All DBs
AA seq
1060 aa
AA seq
DB search
MTGRRGRPSLAQRESMASTRSNSPDPLSVAGTGRLTRSASSRNLAAVAQPVTSAPSTAKR
GRGRPSRASLANDSASSTASASAAASADLTSASEASTPATSNVATPAPSVSGSGHVPLVL
PAALRNPRLGASQSASKIEVQLPTSGELNERALRHSQYAMQPAKRKVGSGYYDDDDDDDE
EDEEPSDNDRDALVARRLQKEENKKSTSSTSLSDAALARRLQEEEYEMDESDVPLATGRG
RRATAAASKAAVKDSDADSEDVPLVSRSKLGGRGRGRPPKSAAPLQRPAKKQKTVVPESD
DEDESADPTEDDELSDLSDNFSELEDDDSNKIPKKAKAKGKAKQPVRRTRASASTLPPAS
EGLPEDDDDALSSLDSGDFDSSDSDAADSDGGIQSAVAAQSRGRRAYQRGSKRRGMLERA
RLENNHPELLTMWQTLEASPALRPDKITQPQQISRQLKPFQLEGVAWMMEMEKTDYKGGL
LGDEMGLGKTIQAVSLVMSDYPQKKPSLVLVPPVALMQWKSEIESYTDGTLKVFVYHGTM
KNAKNMTLKELKKYNVIMMSYNSLESMYRKQEKGFTRQDGVHKEKSLIHQVDFHRIILDE
AHSIKTRTTMTAKACFALKTSYRWCLTGTPLQNRIGEFFSLIRFLQVAPFASYLCKQCPC
AGLDWNLDDDHRCHSCGHAGMQHVSVFNQELLNPIQKFGNFGPGREAFQKLRLMTDRIML
RRLKKDHTNSMELPVKEIYVDRQFFGEAENDFANSIMTNGQRKFETYVAQGVLLNNYANI
FGLIMQMRQVADHPDLILRKHGEGGQNTLMCGVCDEPAEDAIRSRCKHDFCRACARSYLL
SSAEPDCPRCHIALAIDLEQPEIEQNEADVKKSSIINRIKMEEWTSSSKIELLVHELHKL
RSDNASHKSIIFSQFSSMLQLIEWRLRRAGITTVMLDGSMSPAQRQASIDHFMTKTECEC
FLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRCHRIGQTRPCTITRLCIEDSVE
SRMVLIQEKKTNMINSTVNADDKAMESLSPEDMQFLFRGS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgactggccgtcgtggtcgcccttctctcgctcagagagagagcatggcctccacccga
agcaactcccctgaccctctgtctgttgctggtaccggccgtctcactagatctgcatcg
agccgtaaccttgcagctgtggctcaacctgtgacttcggccccttcgactgccaagaga
ggtcgaggtcgacccagcagagcctccctggccaacgactcggcatcctcaactgcgtct
gcgtctgctgcggcatctgccgacctcacttctgctagtgaagcctccactcctgctact
agcaacgtcgctacacccgctccctcagtctctggctctggccatgtccctctcgtgctg
cctgccgctttgagaaacccccgtctcggagcatctcagtctgcatccaaaatcgaggtc
cagcttcccacttctggtgaactcaacgagcgtgctctgcgccacagccagtatgccatg
cagccagccaagcgcaaggttgggagtggttactatgacgacgacgacgacgacgatgaa
gaggatgaggagccatctgacaatgatcgggatgctttggtcgcccgtcgcctccagaaa
gaagagaacaagaaatcgacttcctccaccagcctttctgatgccgcccttgctcgacgt
ctccaggaagaggagtacgagatggatgagtctgatgtccctcttgccaccggtcgcggt
cgtcgtgcgactgctgccgcttctaaggccgcggtaaaggacagcgacgccgactctgaa
gacgttccgcttgtttctcggtccaagcttggtggtcggggtcgaggtagaccccccaag
agcgccgcccctctgcagcgacccgccaagaagcagaagactgtggttcctgagtcggat
gacgaggacgaatccgcagatccgacagaggacgacgagcttagcgatctctcggacaac
ttttctgaactggaggacgatgatagcaacaagatccccaagaaagcaaaggcaaagggc
aaggctaagcagccagtcagacggactagagcttctgcttcgacgctgcccccggcctct
gagggacttcctgaagacgatgacgatgctttgtcgagcctcgatagcggcgactttgac
agctcggactctgacgcggccgatagtgacggcggtatccagagcgccgtggcggcacaa
tcccgtggtcgccgcgcctatcaacgtggctccaagcgccgcggcatgcttgaacgcgcc
aggttggagaacaaccatcctgagcttctcaccatgtggcagactttggaggcgtctccg
gccctcaggcccgacaagattactcagccgcagcagatctcgcgtcaactcaagcccttc
cagctcgagggtgtcgcttggatgatggagatggaaaagaccgactacaaaggcggccta
ttgggtgatgagatgggtctcggcaagactatccaggcagtgtccctggtcatgtccgac
tatccccagaagaagccctccctcgtcctggtccctcccgttgctctgatgcagtggaag
agcgagattgagtcctatacggacggcaccctcaaggtctttgtctaccacggtactatg
aagaacgccaagaacatgaccctgaaggagctcaagaagtacaatgtcatcatgatgtcg
tacaacagtctggagtccatgtaccgaaagcaggagaaaggcttcacccgccaagacggt
gtacacaaggagaagagcttgatccaccaggtcgacttccaccgcatcatcctcgacgag
gcccacagcatcaagacccgcactaccatgacggccaaggcttgctttgctctgaagacc
tcgtaccgttggtgcctcaccggtacgccgcttcagaaccgcattggcgagttcttctcc
ttgatccgcttccttcaagtcgcacctttcgcgtcgtacttgtgcaagcagtgcccctgt
gccggcctggattggaacctcgacgacgatcaccgttgccactcgtgcggacacgccggc
atgcagcacgtgtctgtattcaaccaggagctcctcaaccccattcagaagtttggcaac
tttggaccgggccgcgaagccttccagaagctccgtctgatgaccgatcgcatcatgctt
cgtcgcctgaagaaggatcacaccaactccatggaactccccgtcaaggagatctacgtt
gaccgccaattctttggtgaagcggaaaatgatttcgccaacagcatcatgaccaacggc
cagcgcaagttcgagacgtacgtcgcccagggtgtcctgctcaacaactacgccaacatc
tttggtctcattatgcagatgcgccaggtggccgatcatcccgatctgatccttcgcaag
catggagagggcggccagaacacacttatgtgcggcgtatgtgacgagccggccgaggat
gccatcaggagccgctgcaagcacgacttttgccgcgcctgtgctagaagctacctgttg
tcttccgctgagcctgactgtccccgctgccacattgcgctggccatcgacttggagcag
cccgagattgagcagaatgaggccgatgtcaagaagtcttcgattatcaatcgaatcaag
atggaagaatggacttcttcctccaagattgagcttctcgtccacgagcttcacaagctt
cgctccgacaatgcttcgcacaagtcaatcatcttttcgcagttctcgtccatgctgcag
ctcatcgagtggcgtcttcggcgcgccggtatcaccaccgtcatgctcgacggcagcatg
agccccgcgcagcgccaggcgtccatcgaccacttcatgaccaagaccgagtgcgagtgc
ttcctcgtttctctcaaggccggtggtgtcgcgctcaacctcaccgaggcgtctcgcgtc
tttatcgttgacccttggtggaaccctgccgccgagtggcagtccgccgatcgttgccac
cgcattggtcaaacccgcccctgcaccatcacccgtctctgcatcgaggactcggtcgag
agccgcatggtgctgattcaggagaagaagaccaacatgatcaactccaccgtcaacgcc
gacgacaaggccatggagtctctgagccccgaggacatgcagttcctgttccgtggttct
tag
DBGET
integrated database retrieval system
