Colletotrichum fioriniae: CFIO01_10855
Help
Entry
CFIO01_10855 CDS
T04796
Name
(GenBank) elongation factor Tu GTP binding domain-containing protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cfj
Colletotrichum fioriniae
Pathway
cfj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CFIO01_10855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfj03041
]
CFIO01_10855
Spliceosome [BR:
cfj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
CFIO01_10855
Complex C
U5 SnRNP specific factors
CFIO01_10855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
EFG_III
GTP_EFTU_D2
EFL1
MMR_HSR1
DUF3994
Motif
Other DBs
NCBI-ProteinID:
EXF76600
UniProt:
A0A010QIQ5
LinkDB
All DBs
AA seq
986 aa
AA seq
DB search
MDDLYDEFGNFIGEDVGSEEASERGVEGDYVYGDDASEAPAPTGQELMEIDGTGTEDGPS
NAIILHEDKQYYPTAQQVYGDEVEVLVREEDEQLLSQPIIAPVEQKKFNIEEADLPPVFF
ERSFMTDLMNFPDQIRNVALAGHLHHGKTAFMDMLVLETHDITDRLERRVGKKRDEQLRY
TDVHVVERERGVSIKASPMSLVLPSSKGKSHLVNILDTPGHVNFVDEVAASLRLADGVCL
VVDVVEGVQVNTEQIIKHAVLEDIPLTLIVNKMDRLILELKLPPKDAYFKLKHVIEEVNT
VIENTIPGKGEERRISPEKGNVLFACTDMGWCFTLQSFAKMYADTYGGINTEDFAKRLWG
DIYFNPEKRNFTRKPLETRSSRSFVNFVLEPIYKIFTHTISDSPEELKVVLGSLGITLKP
SQYKADAKVLLKLVCEQFFGSSTGFVDMIVGHIPSPDQSAEKYLEKYYTGPLDTKLAQSM
KACNQDGPLVIHVTKLFSTADAKNFYSFGRVLSGTAHPGSQVRVLGEGYSIDDDEDMAMA
TISDVFIAESRYNIPTDGVPAGNFVLLGGVDNSIVKTATLIPPKLEDDEDAYIFKPVTHF
TESVLKVAVEPINPSELPKMLDGLRKIQKSYPLITTKVEESGEHIVLGTGELYMDCVLHD
LRRLYADMEIKISDPVTRFCETVVEQSATKCYAITPNKKNKITMVAEQLDKGISEDIESG
KVKIKDPIRKTAKYFEDTYGWDKLAARSIWAFGPDEMGPNILQDDTLPSEVDKKLLTTVK
ETIRQGFSWATREGPLCEEPIRNTKFRITDVSLASEAIFRGGGQIIPTSRRACYSSFLMA
SPRLMEPLYSVSVTGPEDSATEVYTTLARRRGHVLQDGPVAGTPLYRVNGLIPVIDSFGF
ETDLRIKTKGMAMVSLTFDSWSIVPGDPLDKEVILRPLQPASAQATARDFVLKTRRRKGL
SEDVSVATFLEPEFYQSLMESGALGD
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctgtacgacgagttcggtaacttcatcggcgaggatgtcggctctgaagag
gcgtctgaacgaggggtggagggcgactacgtctacggcgatgatgctagcgaggcgccc
gcgccaactggccaagaattgatggaaattgatggcacgggaacagaagacggcccatca
aatgcgatcatcctgcacgaggacaaacaatactacccgacggcacaacaagtatacgga
gatgaagtcgaagttctcgtacgagaggaagacgagcagttgctctcgcagccgatcatt
gcgccagtcgagcagaagaagtttaacatcgaagaggccgacctaccacctgtattcttt
gagcgcagcttcatgacagacctcatgaacttccccgatcaaatacggaatgttgcattg
gcaggacacctccaccacggaaagacggcgttcatggatatgctggtgttggagacccac
gatatcacggacaggctcgagcgccgggtcggcaagaagagagacgagcagcttagatac
accgacgtccacgttgtggagcgggaaagaggcgtgtcgatcaaggcttcgcccatgagc
ttggttctcccgagttccaaaggaaaatctcacttggtcaacattttggatacccccggt
cacgtcaacttcgttgatgaggtcgcggccagtctgagattagccgacggagtctgcttg
gttgtcgatgtcgtggagggcgttcaggtcaacacggagcagatcatcaagcacgccgtt
ttggaggatatcccgctgacgctcattgtcaacaagatggaccgcctcatcttggagcta
aagctgccgcccaaggatgcctacttcaagctcaagcatgtcatcgaggaggtcaacacg
gtaatcgaaaacaccatccctggcaagggcgaggaaagacggataagccccgagaagggc
aatgttctttttgcttgcacggacatggggtggtgcttcactctgcagtcattcgcaaag
atgtacgcagacacgtatggtggcatcaacaccgaggatttcgcaaagaggttatggggc
gatatctacttcaaccccgagaagcgaaacttcacccgtaagccgctagagacacggtcg
agccgatccttcgtcaacttcgttctggagcccatctacaagatctttacacacacaatc
agcgacagtcccgaggagttgaaggttgtcctgggcagtctcggcatcaccttgaagccc
tctcagtacaaggctgacgctaaggtgctgttgaaactggtctgtgagcagttctttggt
tcctcgacaggattcgtcgacatgatcgtgggccacattccttcacctgaccagtctgcg
gagaagtacttggaaaagtactacactggccctctggatacgaagttggctcagtccatg
aaggcttgcaaccaagacggtccgctagtaattcacgtaacaaaacttttcagcaccgca
gacgccaagaacttttactcattcggtcgcgtactaagtggcacagctcaccctggctcg
caagtccgtgttctcggagagggatactcgatagacgacgatgaagacatggccatggca
acgatttctgacgtctttatcgcagagtcgaggtacaacattccgaccgacggcgtaccg
gcgggcaatttcgtactgctcggtggagtcgacaactctatcgtcaaaacggcgacactc
atcccgccgaagcttgaagatgacgaggatgcttacatcttcaagcctgtcacacatttc
accgagtctgtactcaaggtagctgtcgagcccatcaacccatcggaattacccaagatg
cttgacggtctgagaaaaatccaaaagagctatcctcttattactacgaaagtcgaggaa
tccggagagcacatcgtcttgggcaccggcgaattgtacatggactgtgttctccatgac
ctgagacgtctctacgccgatatggagattaagatttcggatcctgtaactcgcttctgc
gagacggtcgttgagcagtcagcgaccaaatgctatgccatcacgccgaacaagaagaac
aagattacaatggttgccgagcagctggacaagggcatctcggaggacattgagtcaggc
aaggtcaagatcaaggaccctattcgcaagacggccaagtacttcgaagacacgtatgga
tgggacaagctggcagcgagaagcatctgggctttcggtcccgatgagatgggccccaac
attctacaggacgacacgttgccctcagaggtcgacaagaagctcttgacaacggtcaag
gagaccatccgccaaggcttcagctgggcaactagagaagggcccctgtgcgaagaaccc
attcgaaatacaaagttcaggatcacggatgtgtcgttggcgtcggaagctatcttccgg
ggaggcggtcagatcatccccacttccaggcgggcctgctactcttccttcctgatggct
tcccctcgactgatggagcctctgtactccgtctctgtgactggccctgaggactccgca
acagaggtctatacaacattggctaggcgccgtggtcacgtccttcaggatggacctgtg
gccggcacgcctctctaccgcgtcaacggtctgattcctgtcatcgactcctttggcttc
gaaacggacctgcgcatcaagaccaagggcatggccatggtcagcttgacgtttgacagt
tggagcattgtgccaggtgatcctctcgacaaggaggtcattctgcggccgctgcagccg
gcgagcgcacaagccacggcgagagacttcgtgctgaagacgagaaggagaaagggtctc
agcgaggatgtgagcgtggccacgttcctggagcctgagttctaccaaagcctcatggag
agtggcgctcttggcgactaa
DBGET
integrated database retrieval system
