KEGG   Cornus florida (flowering dogwood): 132277041
Entry
132277041         CDS       T11641                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cflo  Cornus florida (flowering dogwood)
Pathway
cflo03420  Nucleotide excision repair
cflo04120  Ubiquitin mediated proteolysis
cflo04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cflo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132277041
   04120 Ubiquitin mediated proteolysis
    132277041
  09124 Replication and repair
   03420 Nucleotide excision repair
    132277041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cflo04121]
    132277041
   03400 DNA repair and recombination proteins [BR:cflo03400]
    132277041
Enzymes [BR:cflo01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     132277041
Ubiquitin system [BR:cflo04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   132277041
  Multi subunit type E3
   SCF complex
    Ring finger protein
     132277041
   Cul2 complex
     132277041
   Cul3 complex
     132277041
   Cul4 complex
     132277041
   Cul7 complex
     132277041
   Cul8 complex
     132277041
   Cul9 complex
     132277041
DNA repair and recombination proteins [BR:cflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132277041
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132277041
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 132277041
NCBI-ProteinID: XP_059634730
LinkDB
Position
Unknown
AA seq 125 aa
MASLDTDVTMVPAGEGSSGAGPSSTVPASSGSTKKAKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcttctctagataccgacgtgacgatggttcctgcaggagagggttcgagcggagcc
ggaccttcttccactgttccagcttcatcggggtcgacgaagaaggctaagcgattcgag
atcaagaagtggaacgccgtcgctctctgggcttgggatattgtcgtggataactgtgcg
atttgcaggaaccatatcatggatctatgcatcgagtgccaggctaaccaagctagtgcc
acaagcgaggaatgcactgttgcgtggggtgtttgcaaccatgcattccacttccactgc
atcagccgctggctcaagactcgtcaagtgtgtccattggataacagtgagtgggagttt
cagaagtatggtcactag

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