Chryseobacterium fluminis: ODZ84_18940
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Entry
ODZ84_18940 CDS
T09749
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cflu
Chryseobacterium fluminis
Pathway
cflu01501
beta-Lactam resistance
cflu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cflu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ODZ84_18940
01503 Cationic antimicrobial peptide (CAMP) resistance
ODZ84_18940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cflu02000
]
ODZ84_18940
01504 Antimicrobial resistance genes [BR:
cflu01504
]
ODZ84_18940
Transporters [BR:
cflu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ODZ84_18940
Antimicrobial resistance genes [BR:
cflu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
ODZ84_18940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UZT97244
LinkDB
All DBs
Position
4133149..4136343
Genome browser
AA seq
1064 aa
AA seq
DB search
MFKKFIRRPVLSIVISLIIVFMGVLSLVKLPVTQFPSISPPKVNITAEYPGANNELLVKS
VVIPLERGLNGVPGMKYMTSDAGNDGEASIQVVFDLGTDPNVAAVNVQNRVSSVVNKLPP
LVVREGVKITREEPNMLMYINLYSDDPKADQKFLFNYADINVMSELRRVGGVGFADILGT
REYAMRIWLKPDRLTAYSISADEVMESLNAQSLEASPGKTGESSGKRSQSFEYILKYPGR
FNNEKDYGNIILKAKTDGKFVRLKDVADIEFGSSMYDIYSTLNGKPSAAITVKQSYGSNA
SDVIKNVKTLMAELQKTSFPKGMHYDISYDVSRFLDASIEKVIHTLFEAFILVAIVVFLF
LGDWRSTLIPAIAVPVSLVGTFAIMSAFGITLNMISLFALVMAIGVVVDDAIVVIEAVHA
KMEEKHLSPLKATEEAMHEISGAIIAITLVMASVFIPIAFMSGPVGVFYRQFSITMASAI
ILSGVVALTLTPALCALILKNNHGKARKRTPITIFLGKFNNLFTKGAGKYEKMLNKTVKK
KTFTLPLLLAFCACTFFLSNSLPSGFIPAEDQGMIYAIIQTPPGSTLERTNQIAKELLRE
SEGIDGVQSVSSLAGYEILTEGTGSNSGTCLINLKSWEERSESAAEIIEKLEEKAKNIPG
ANIEFFQPPSIPGYGAAGGFELRLLDKAGSGDYQKMEKVSNDFVTELKKRPELGSAFTFY
SASFPQYMLKIDNDLAEQKGVTIEKAMDNLSTLIGSNYETSFIRFDRPYKVIVQAGPQYR
ALPTDLLKLYVKNDKDQMVPYSDFMHLEKVYGLSEITRHNMYNSAEVSGTPAPGYSSGQA
IAAIKEVADKTLPRGFGIDWAGISKDEVSRGNEAIFIFLVCLGFVYLILAAQYESFILPL
PVILSLPTGIFGAFLCLKLLGLENNIYAQVAMVMLIGLLGKNAVLIVEFAVQKKAEEGIP
VAQAAIEGAAIRFRPILMTSFAFIAGLIPLVMATGPGAIGNRTIGTAAAGGMLIGTIFGL
MIIPGLYYIFGTIADKSKLARYEEENPLTEQTEPYQHDNKHEDL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaattcattcgcagacccgttctgtctatcgtaatctcattgattatcgta
tttatgggagttttatcacttgtaaaacttcccgtaacacaatttccgtctatctcaccg
ccaaaagtaaatatcaccgcagaatatccgggagccaacaacgaattgttggtcaaatcc
gtggttattccgctggaaagaggtttaaatggtgttccgggcatgaaatatatgacttcc
gacgccggaaacgacggggaagcctccattcaggtagtttttgatctgggaaccgacccg
aacgtagccgccgtcaatgttcagaaccgagtatcttcggttgtcaataaacttccgccg
ctggtggtacgtgaaggggtgaagattacccgtgaagagcccaatatgctgatgtatatt
aatttatacagcgacgatccgaaagctgaccagaaattccttttcaactatgcagacatc
aatgttatgtctgaattgagaagggtaggtggtgtaggttttgcagacatcctgggaaca
agggaatatgcgatgcgtatctggcttaaacctgaccggttaacggcttacagcatctca
gcagatgaagtaatggaatcattaaatgcacagagtcttgaagcatcacctggaaaaacc
ggtgaaagttcgggaaaaagatcacagtcatttgaatatattttaaaatatccgggccgt
ttcaataatgaaaaggattatggtaatattatccttaaagcaaaaacagacgggaaattt
gtaaggctgaaagatgttgccgatattgaattcggttcttcaatgtatgatatttactct
acattgaacggaaaaccttctgcagcaattacggtaaagcaatcttacggttccaatgcc
agtgatgtaatcaaaaatgtaaaaaccctgatggccgagctgcagaaaaccagctttccg
aaaggaatgcattacgacatcagttatgatgtatcaagattcctggatgcctcgattgaa
aaagtaatacacaccttatttgaagcctttatactggtagccattgttgtatttcttttc
ctgggagactggcgatccaccttaattcctgccattgcagttccggtatcgctggtcggt
acttttgcgatcatgtccgcttttggtattacgctgaatatgatttcactttttgctttg
gtaatggccatcggggttgtcgtggatgatgcgatcgtggtgattgaagccgtgcacgct
aagatggaagagaaacatctgtctccgctgaaggcgaccgaggaagcgatgcacgaaatc
agcggagcgattatcgccattactctggtaatggcatctgtattcattcctattgcattt
atgtccggtccggtgggagtattttaccgacagttctccattacgatggcttctgcgatt
atcctttcgggggttgtggccctaaccctgacgcctgctttatgtgccctgatcctaaaa
aataatcatggaaaagcaaggaaaagaacgccaattaccattttcttaggtaagtttaat
aatttatttacgaaaggagcaggaaagtatgagaaaatgttaaataaaacggttaaaaag
aaaacatttactctgccgttattattggcattctgtgcctgtacatttttcttaagtaac
tcactgccttcaggatttattccggcagaagaccaggggatgatctatgccattattcag
acgcctccgggttctaccctggaaagaaccaatcagattgcaaaggagctgcttagggag
tctgaaggtatcgacggcgtacagtctgtctcgtcattggcgggttacgaaatcctaacg
gaaggaacaggttccaactcagggacctgcctgattaaccttaaaagttgggaggaacgt
tcggaatctgctgcagaaattatcgaaaagcttgaagaaaaagctaaaaatattccggga
gccaatatagagttcttccagccgccatccattccgggatatggagcagccggtggtttc
gaactccgtttgcttgataaggccggaagcggtgattatcagaaaatggagaaggtgagc
aacgacttcgtgaccgaactgaaaaagcgtcctgaactgggatctgcatttaccttctat
tctgcaagtttcccgcagtatatgctgaaaattgacaatgacctggctgaacagaaagga
gtgaccatcgaaaaagccatggacaatttatcgacgctgattggctcgaattatgaaacg
agtttcatccgtttcgacaggccatataaggtgattgttcaggcgggaccgcaatatcgt
gcattaccgacggatttattaaaattatatgttaaaaatgataaggaccagatggttccg
tactcagatttcatgcacctggaaaaagtgtacggcttatcagaaattacaagacataat
atgtataattctgctgaagtaagcggaacccctgccccgggctacagttccggacaggcg
atcgcagcgataaaagaagtagcagacaagacgcttccgagaggtttcggcatcgactgg
gcggggatttcaaaagatgaagtgagtcgtggaaatgaagcaatatttatcttcctggtg
tgtttgggattcgtttatctgatccttgctgcacagtatgagagttttattcttccgtta
ccggtgattttatctttacccacaggtatttttggagcctttttatgtctgaagttactg
ggattggaaaacaacatttatgcccaggtggccatggtaatgctgattggtttattaggt
aaaaatgccgtattgattgttgagtttgcggtgcagaagaaggcagaagaaggtattccg
gtggcacaggcagctattgaaggagctgcgatccgtttccgtccgattttaatgacctca
tttgccttcattgcgggactgattccccttgtaatggcaaccggacccggagcgatcggt
aaccggaccatcggtacagcggcggcaggaggaatgttgatcggaaccatattcggatta
atgatcattccgggattatattacattttcggaacgattgcggataaatccaagctggca
cgatatgaagaggaaaaccctcttacagaacaaacagaaccttatcaacacgacaacaaa
catgaagatttataa
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integrated database retrieval system
