Clostridium formicaceticum: BJL90_20400
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Entry
BJL90_20400 CDS
T05005
Name
(GenBank) alanine racemase
KO
K18348
serine/alanine racemase [EC:
5.1.1.18
5.1.1.1
]
Organism
cfm
Clostridium formicaceticum
Pathway
cfm01502
Vancomycin resistance
cfm02020
Two-component system
Module
cfm_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
cfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJL90_20400
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BJL90_20400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
cfm01504
]
BJL90_20400
Enzymes [BR:
cfm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
BJL90_20400
5.1.1.18 serine racemase
BJL90_20400
Antimicrobial resistance genes [BR:
cfm01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
BJL90_20400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Acyl_transf_3
Motif
Other DBs
NCBI-ProteinID:
AOY78015
LinkDB
All DBs
Position
complement(4378494..4380620)
Genome browser
AA seq
708 aa
AA seq
DB search
MMKDRAYKGIDYFRFIAAILVIAIHTFPLLSVNTEADLILTRVIGRVAVPFFFMTTGFFI
FASYDEGSFSYKSFLLKIVKLYGVSILLYLPLNFYAGHFSGKYAGAFILKNIFFNGTFYH
LWYFPAIIIGVGVFLLLLKYCKMHTAIIIALLLYLIGVFGDSYYGIANEIPFLRNFYDIL
FFFFDYTRNGLFFSPIYLFLGALFSKIPQRHSFKTSMVGLLLSLSILMVEGLLIHHFSAP
KHDSMYIALLPSMYFLFQMLLLWKGSSHKSLRTIAMLVYIIHPWCIVLIRGFARLTKTEA
FFIDNSILHFTLVTLLSVFTSMIFNFIWNKERKNLDQKGRAWLEIDLSNLKHNFLQLKDV
LPKGCQVMAVVKANAYGHGDIQIAYELQTMGVNAFAVASLEEGIRLRKNGIKGCILILGY
IYPEEINRVIKYDLTQTVIDYHYATVLNQYGKKIKVHIKIDTGMNRLGENFHHIDEITKI
FQLPNLVIEGMYTHLCVADSQIRKDVAFTIQQVENFYKVVDYLKGLGYSSLKLHIQSSYG
VLNYPEISCNYARLGIALYGLLSNEMDETKAKAKLRPVLSIKARISIIKTLKASETIGYG
RQFVANTPMKIATVTLGYADGIPRNLIRGHVLLRGVKVPIIGRICMDQLTIDVTNIPNVE
QGDIVTMIGQEGKEKITAGEVAGQAGTITNELVSRLGSRLEKVYLKKL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagacagagcgtataaagggattgattactttcgttttattgcagctatttta
gtaattgccattcatacctttcccttattatctgtaaacacagaggcggatttgattttg
accagggtaatagggcgtgttgctgtcccctttttctttatgacaacaggattttttatt
tttgcctcttatgatgaagggagcttttcctataaaagcttcttgctaaaaatagtaaag
ctttatggtgtgtcaattttactatacctacctctaaacttttatgcagggcattttagt
ggaaaatatgcaggggcattcattttaaagaatatttttttcaacggaactttttatcat
ctgtggtattttcctgctattatcataggggttggggtgtttcttcttttattaaaatac
tgtaaaatgcacactgcaataattatagcactgttactttatttgataggtgtgtttggt
gacagttactatggcatagctaatgaaattccttttttaagaaatttctatgacattttg
ttttttttctttgactatacaagaaatggtttgtttttttctcctatttatttgttttta
ggggcattattctctaaaattcctcaaagacattcctttaaaaccagtatggtgggtctc
ttgctctctttatcaattttaatggtagaagggttattgatacaccacttttcagcccct
aaacatgatagtatgtatatagcgttgctgccatccatgtactttctttttcaaatgctt
cttctgtggaaaggtagtagccataaatcgctacgtactattgctatgttagtatatata
atccatccatggtgtattgttttgattagaggtttcgctagattaacaaaaacggaggct
ttcttcatagataacagcatactccattttacattggttacacttttgtcagtttttact
tctatgatcttcaactttatatggaataaagagagaaaaaacctggatcaaaaaggaaga
gcttggctagaaattgatttatcaaatttgaagcataatttcttacagttaaaagatgtg
ctgccaaaaggatgccaagtcatggcggtggttaaagcaaatgcttatgggcatggggat
attcaaattgcttatgaattgcagaccatgggggtcaatgcctttgcagtggcatcatta
gaggaaggaattcgtctccgcaaaaatgggataaagggatgtattttaatcttaggttat
atctatccagaagaaataaatagagtgataaagtatgatctaacccaaacggttatagat
tatcattatgctactgttttgaatcaatatgggaaaaaaatcaaagttcatattaaaatt
gatactggtatgaatcgtttaggtgaaaattttcaccatatagatgaaatcacaaaaata
tttcaattgccaaatttagttattgaaggaatgtatacgcatttatgtgtagctgatagc
cagataagaaaggatgtagcatttactatacagcaggttgaaaatttttataaggtagta
gactacttaaagggattaggctattcttcactgaaacttcatattcaaagtagttatggc
gtattgaactatccagagatctcttgtaattatgcacgactgggcattgccctgtatggt
ctgttgagtaatgagatggatgaaacaaaagcaaaagcgaaacttcgtccagtactttct
attaaagccagaatttctatcataaaaaccctcaaagcttctgaaacgatagggtatgga
cgacaatttgtagccaatactccaatgaaaattgccaccgtcacccttggctatgcagac
ggtattcctagaaatcttattcgtgggcatgttcttttaagaggtgtaaaggtaccaatt
ataggtagaatctgtatggatcaattaaccattgatgttaccaatatcccaaatgtagaa
caaggggatatcgttacaatgatagggcaagaaggcaaagaaaaaatcaccgcaggagaa
gtggctggacaagctggaacgattaccaatgagttggttagtagactaggcagccggctt
gaaaaagtttatctaaaaaaactataa
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