Camponotus floridanus (Florida carpenter ant): 105257116
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Entry
105257116 CDS
T03919
Name
(RefSeq) LOW QUALITY PROTEIN: 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105257116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfo03041
]
105257116
Spliceosome [BR:
cfo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105257116
Complex C
U5 SnRNP specific factors
105257116
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Motif
Other DBs
NCBI-GeneID:
105257116
NCBI-ProteinID:
XP_025267471
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDENEYGNVGDDTEDRERSDEEMEEDRDESREQLEQGSS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPDTTY
SIEFLAGINRNAPHLLETVVLLGQSSIMCKTTLVDCLVQQHILTXHSITDEKPLRYTDTL
FTEQQRGGFYKTTPVTLLLQDVWQLYYTKTNDIIQVETLVQEEDAQPLDKPLIAPTRKPK
FLENQTLYSSDVENPAFVSPAVGNVCFASSEYNVCFTLKSFAALYARNYPGLNPGEFAKR
LWGDIYFNPKTRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIR
LTSEEMKMNIRPLLRLVCTRFLGDMCGLVDMCVAHVPSPQAHAPNKVQHVYTGPIDSPLA
QDMVNCDPDGRLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDS
RVLTVGRLWISEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDLNNSEDLHIFRPLKF
NTQSVIKIAVEPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMH
DLRRMYSEIDIKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEA
EHVRITWNKKRLGEFFQTKYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKTLLNSA
RDAIIQGFQWGTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLM
ATPRLMEPYLFVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFG
FETDLRTHTQGQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKG
LSEDVSINKFFDDPMLLELARQDVLLNYPL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgatttatatgacgaatttggaaactatattggtcctgatctggcatcagag
agcgaggatgaaaatgaatatggcaatgttggtgacgataccgaagatagagaacgatcc
gatgaggaaatggaagaagacagggatgaatcgcgagaacaattggagcaaggatcttct
atggcagttgtattacacgaagacaaacgatattatccaagtgcattagaggtgtatgga
cctgaggtagaaacacttgtgcaagaagaagatgcgcagccattagataaaccattgata
gcacctactagaaaaccaaagttccaaataaaacagcaacagctgcctgatacgacatat
agcattgaattcttggcaggaataaatcggaatgctccgcatctattagaaactgtggtt
ttgctgggacaatcttcaatcatgtgcaaaaccactttggttgattgtttggtacaacaa
cacatccttacttaacacagtataactgatgagaaaccactgaggtatacagatacattg
tttaccgagcaacaaaggggtggtttctacaaaacaactcctgttactcttttgctacaa
gatgtatggcagttgtattacacgaagacaaacgatattatccaagtagaaacacttgtg
caagaagaagatgcgcagccattagataaaccattgatagcacctactagaaaaccaaag
ttcctagaaaaccaaacattatactcctcggatgtcgagaatcccgcttttgtttcgccc
gctgttggaaacgtttgttttgccagttctgaatacaatgtatgcttcactctgaaatca
tttgctgccctttatgctagaaactatcccggactcaatcccggcgagttcgccaagcga
ctctggggcgatatttattttaatcctaaaacgcgaaagttcactaaaaaacctccgcac
aatacagcgcagcgaagctttatcgagttcatcttggagcctctgtataagatatttgcg
caagtcgtcggcgacgtagacacaacgttaccagatgttttggacgaacttggcatacga
ttgacatccgaagaaatgaagatgaatatacgaccgctgctaagacttgtctgtacacga
ttcttaggagatatgtgcggattagtcgatatgtgtgtcgctcacgtacctagcccacaa
gcacatgcacctaataaagtacaacatgtttatactggtccgatagattcaccgctcgcg
caggatatggttaattgtgacccggacggaagattaatgattcatagtacaaagatgtat
ccaaccgaggattgcactttatttgtagtgcttggcagagttatgtctggcacgctggaa
gcgggacaacgtgttcgcgtgttaggcgaagcatattcacgcacggatgaggaagattca
cgtgttctcacagtaggtagattatggatcagtgaagcacgttactcgatcgaattgagt
cgagtgcccgcgggtaattgggtccttatcgagggtatcgatcgaccgatcgtgaagact
agcaccattacggatctcaataattcagaagatttgcatatctttcggccactcaagttc
aacacacaaagcgtcatcaaaatcgccgtcgagccagtcaatccatctgaattacccaag
atgttggatggtttacgaaaagtgaacaagagctatccattgttgggtacgcgggtggag
gaaagcggtgagcacgttgtcctgggaactggcgaactctatctcgattgcgcgatgcat
gatctgcgtcgcatgtattcagaaattgatataaaagtggccgatcccgtagtcgctttc
gcagaaaccgtagtggagaccagttctctcaaatgtttcgctgaaacgccgaataaacgg
aataaattgacgatgatagcggaaccactggagagaggtcttgctgaggatatagaagct
gaacatgtccgtatcacatggaacaaaaaaagactaggagaatttttccaaacaaaatac
gattgggatttattggcagcacgtagtatatgggcatttggtcctgattctacaggacct
aatatcctagtggacgatactttaccttcagaagtagataaaacactattgaatagtgca
cgtgacgctatcattcagggctttcagtggggaactcgcgaaggaccattgtgcgaagag
ccgatccgaaatgtcaaattcaaaatcctcgatgctgtcatcgcgcaggagccattgcat
cgaggaggcggccaaatcattcctactgctcgacgtgtcgcatattctgcttttctcatg
gcgactccgcgtttaatggagccttatctgtttgtcgaagtgcaagctcccgcggattgc
gtgtccgctgtttatacagtcttggcgaaacggcgaggtcatgtaacgcaagatgccccg
gtacctggcagtccattgtatacgataaaagcttttataccagccatcgacagttttggc
tttgaaacagatttacggacgcacacccaaggtcaagcgttttgcttatctgtctttcat
cattggcaaatcgtgcccggtgatcctctggacaagagtataactatcagaccattggaa
ccacagccagctacacatctagccagagagtttatgttgaaaacgcgaagacgcaagggc
ctgtccgaggacgtttccatcaacaaattctttgacgaccccatgttgctcgagttggct
cggcaggatgtgctgttgaattaccctctctaa
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