Camponotus floridanus (Florida carpenter ant): 105259080
Help
Entry
105259080 CDS
T03919
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
cfo
Camponotus floridanus (Florida carpenter ant)
Pathway
cfo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cfo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105259080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfo03019
]
105259080
03032 DNA replication proteins [BR:
cfo03032
]
105259080
Messenger RNA biogenesis [BR:
cfo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
105259080
mRNA cycle factors
Common to processing body (P body) and stress granule
105259080
DNA replication proteins [BR:
cfo03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
105259080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
105259080
NCBI-ProteinID:
XP_011269112
LinkDB
All DBs
Position
Unknown
AA seq
1732 aa
AA seq
DB search
MANRDKGRRKWGGFSQELTNSKLEKDKLTGMRGGGNRASQALYRPGSGPLRKSGRSSNAA
DEYDNENGSQEKSRSTSVQYRLRQSQLNRSNQAQDSPPLSQIDNVTEKLGNTHIDYRNSN
NEPVQSTGHNISAGAGGNDSKKKNRKPEQLLYVPKKVKEALAEQDGINRSPSHTAWERER
EESDDRDSHSNRSHRSDRNRASNHSVRDNGNEGRGKDDNSKRYSGNRRHRHVNENEERWR
TDSPISARNYANRKDNLREIRQGSEPLSMTNQNDFNRTRDTRSVEPIGHSDKFQGKPPSG
RRNNAKDSLSKNKLELMPPRFQKKYLIDNGYVLPSNNPGTSTEDSWNGSSVTFQQASSSY
NYPSTMQHSQTMQNLPPSGPPLPPQSNWANTVPVRSRGRGRLRPEELEGTASSIFRPVTP
EQYSAPSSRSHTPSQEYMNRSYDRRGSNSTMYTSMESLSRADSAMMPPPSSASPATSQSN
SNRGYKSPENHRRGATSPINNRTNNMQRTTSNTHEHNSSLDKQSNQQNTNLSSMKSESFN
PSSITASETFDWSEEVELNEKLEQEYLSRSSSVLSIRESVSMPRSQAVGESYKRRKKKKR
DKHRDTDRGSSRDKGRGNSRERQKNQQNRENDNYNINQKNNNNNNNSNRRYDHRRRSIIQ
RSRESSKDRNYGNSYRSFDDLHRRRTDRYLDEDWRTGRKISTCESDEGRQTPKVSSHTIP
LPSVNSNSTAHHSSPTGHNNAQPGVLILPNDVNQSSPNQTTASSQQGTGQQQQQQQRTLF
DPNNPHKPIVITSPGNRAAVQRDNDMQISSVPVFQSNVGVTPSHYSFQSTQLDGMPSPYM
NDQIGNMRPSWYEPFSASFHSAKNHCLLLDIERADLELQWIISSGGFTSRLDRVAYIRHF
LQQSLKILLETDIKFCQAENVEQHFWKILFYNLIEMLRKAPKENVEGRERYKQIMLNIID
EGTTYLESLLTALETTYEFKLDTFLASSSLPKGLGLLGLALVSAQKIFLFLGDLARYKEQ
ANETSNYGKSRQWYLKAQQINPKNGRPYNQLALLAHYARRKLDAVYYYMRSLMASNPFHS
ARESLIALFDENRKKYLHYYESIERKRKEERESKERARMKEKEGANIIGGGLRRETWIHP
GDGRRVRRTTSTSTANETRLSHTSDLEELSQLTSVEVNKRFVTSYLHVHGKLITKIGMET
FQEAGVQMLKEFRALLQHSPLPLSGTRLLQLLALNMFAIETTQLKDSQMEQGYRSEVQER
ALVVSLQMFSLILERGVSLLKAQLDSGQEPRLVVGEDLQVLLPAIKIWCDWMLCHSTVWN
PPPSCTDYRVGPPGDAWSRLATMVNLLEKLNYTRTTLIQSKDTEDREENKDLELVKLPED
ITLAGFTPLMLNPQDPCYVEKTEDMEVAQVCLRISKILFFGQVFLCGLETPVLKLQKSET
GVSEYVSVVEASSTSSPSSPPTQSDSELMVESYSEGEEESISTLRRLPSCGNVPDDTTAP
VAAVEIRSLIERKEELERRQRKQDRHRQRVQAILQKSSVSVEIEVRPRQLVPDTNCFIDY
LPQLQIIARATSGAQPIYTLMVPLVVLNELDGLTRGADARDCPPASRATLNPEHVARVAE
SAKAALAFARSRNPAIRCVTTRGTVLPSSTFTAEEDVDKDELTRNDDRILTTCLNLCRSN
KDQANTAEEGQPRRLRREVVLLTEDRNLRVKALARDVPVREVPDFMQWAVLG
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcgacaaaggacgcagaaagtggggaggattttcacaagaattaacaaat
tctaaattggagaaagataaattgacgggaatgcgtggtggagggaatagagcatctcag
gccttatacagaccagggagtggccctttacgcaagtcaggcagatccagcaatgctgcc
gatgaatatgacaatgaaaatggctcgcaagaaaaatctagatcaacttctgtccagtat
cgtttgagacagtcgcaactcaatagatctaatcaagcacaggatagtccacctctgtca
caaatcgataatgtaactgaaaaattaggcaatacgcatattgactatagaaatagcaat
aatgaaccagtacaaagtactggacacaatatcagtgcaggagcaggaggaaatgattca
aaaaagaaaaataggaaacctgaacaattgctgtatgtaccaaaaaaagtgaaagaagca
ctggctgaacaggatggaattaatagatctcccagtcatactgcatgggaacgagagaga
gaagagagtgatgatcgtgattcccattccaatcgtagtcacagaagtgatcgtaatcgc
gcgagcaatcacagtgttcgagacaatggtaatgaaggcaggggcaaagatgacaacagc
aaacggtattcgggcaaccgacgacatcgtcatgtcaatgaaaacgaagaacgttggcga
accgattcgccgatatctgctagaaactatgcgaatcggaaggataatctacgcgaaatt
agacagggttctgaacctctgtctatgacaaatcagaatgattttaatcgtacgagagat
acgcgtagcgtggaacccattggacattcagataaatttcaaggcaaaccaccctctggc
agacgcaataatgcgaaagatagtttgtcgaaaaataagttggagctaatgccaccacgg
ttccaaaagaagtatctcattgataacggatatgtattacctagcaacaatccgggaacg
tccacagaggattcctggaatggtagcagtgttacatttcagcaggcttcatccagttat
aattatccatcaacaatgcaacattcgcaaacgatgcaaaacttgccaccatctgggcca
ccattaccaccacaatctaattgggctaatactgtaccagtgagaagcagaggaagaggt
agacttagaccagaggaattggaaggtacagcaagtagcatcttcagacctgtcactcct
gaacaatattcggcgccgagttccagatcccatactcctagtcaggaatacatgaatcgg
tcttacgatcgccgtggtagtaacagcactatgtataccagtatggagagcttaagccgc
gctgacagtgcaatgatgccaccaccatcatctgcatcgccggcaacttcgcaatccaat
tcaaataggggttataaatcacctgaaaatcatcgcagaggtgcaacatcaccaatcaac
aatcgcactaacaacatgcaaagaacaaccagtaacacgcatgagcataattcgagcttg
gacaaacagagcaatcaacaaaacacgaatcttagctccatgaaaagcgaatcatttaat
ccatcatctattactgcatctgaaacatttgactggagcgaagaagttgaattgaatgaa
aagttggaacaggaatatttgagtcgtagttcgtctgtcttaagtatacgcgagagcgta
agtatgccacgaagtcaggccgtaggcgagagttacaagcgacgtaaaaaaaaaaaacgc
gataaacatcgtgatactgaccgtggtagtagcagagataaagggcgaggcaacagccgc
gaacgtcagaagaatcaacagaacagagagaatgataattacaatatcaatcaaaagaat
aacaataataataataacagtaataggcgatacgatcacagaaggcgtagtattattcag
cgtagtcgagaatcgagtaaagacagaaattatggtaacagttacagaagctttgatgat
cttcatagacgcagaactgatagatatttggatgaggattggagaacaggcagaaagata
tcgacttgcgaatctgatgagggcagacaaactcctaaagtttcttctcatactattcct
cttccgagtgtgaattctaactcgacagcacatcattcgtctccgacaggacacaacaat
gctcaaccgggtgtcttaattttgcctaacgatgttaatcagtcgtctcccaatcagacg
actgcatcttctcaacaaggtactgggcaacagcagcagcaacaacaaagaactttattc
gatccgaataatccgcataaacctattgttattacttcacctggaaatagagcagctgta
caaagggataatgacatgcaaatttcgagtgttccagtatttcaatctaatgtaggtgtc
acaccatctcattattcttttcaaagcactcaattggatggtatgccatcaccatacatg
aatgatcaaatcggaaatatgagaccttcgtggtacgaaccattttcagccagttttcat
tcagcgaaaaatcactgccttctcttggatatagaacgtgccgatctagaattacaatgg
ataataagttcaggtggctttacgtcgcgtttggatagagttgcgtacatacgacatttt
cttcaacagagtttgaagattttgctcgaaaccgatatcaaattctgtcaggcagaaaac
gttgaacaacatttttggaaaatattgttttataatttgatcgagatgcttcgaaaagca
cccaaagagaacgtggaaggacgagaacgttacaaacagataatgttaaatattattgat
gagggtactacttatctggaaagtttactaactgctctcgagactacatacgagtttaaa
ttggacacgtttcttgcatcgtcgagtttacccaagggtctcggactcttaggactagcc
ttagtcagcgcccaaaagatatttttattcttgggagatttggcgagatacaaagaacaa
gcaaacgaaacaagcaattatgggaaatctagacaatggtatctaaaagcgcagcaaatc
aatcctaaaaatggcagaccttacaatcagcttgccttattagcacattacgcaagacgg
aaattggatgctgtgtattactacatgcgatctcttatggcgtcgaatccttttcattct
gccagagagagcttgatagcgctctttgacgaaaacaggaaaaagtatctacattattac
gagtctattgaacgtaagcggaaggaagagagagaatcaaaggagcgggcaaggatgaag
gaaaaagaaggcgcgaatattattggcggtggattgaggagagagacgtggattcatccg
ggtgatggtagacgagtgcgacgtacaaccagcacgtccactgccaacgagacgagattg
tcccatacaagcgatttggaggagttatcgcaattaacaagtgtcgaggtgaacaaacga
ttcgtcacttcataccttcatgttcacggaaaactcatcaccaagatagggatggaaact
tttcaagaagccggtgttcaaatgttgaaggaatttagagccttattgcagcactcgcca
ttaccactttctggtactcgtctacttcagcttttggcgcttaatatgttcgctatcgag
accacgcagctgaaagattcccagatggagcaaggttatagatcagaggtccaagaacgg
gcgctcgtagtatcactacaaatgttcagtctgatcttggaacgtggtgtttccctgcta
aaagctcagttagacagcggacaggagccgaggcttgtggtcggcgaggatctacaagtg
cttctaccagctattaagatatggtgcgactggatgctgtgccatagcactgtttggaat
cctccgccgtcttgtacggattacagagtcggaccgccgggagatgcgtggagtaggctg
gcgacgatggtgaatcttttagaaaaattaaattatactagaacaaccttgatccagagc
aaggatactgaggatcgtgaagagaataaagatctggagctcgtgaaattaccagaagat
atcacgttggcaggatttacgccgctcatgttgaatccgcaagatccttgctacgtggag
aaaacggaagatatggaagtggcacaggtgtgtctgaggataagcaagattctcttcttc
ggtcaagtgttcttgtgcggcttggagacaccggtgctgaaactgcaaaagagcgagacc
ggcgtcagcgaatacgtttccgtggtcgaggcctcgagcacaagttcaccgagttcgcca
ccgacacagagcgactcggagctcatggtggagagttacagtgagggagaggaggagtcg
atttccacattgagaagattaccctcgtgcggcaacgtgcccgacgatacgacggctccc
gtggcggccgtcgagataaggtcgctgatcgagaggaaggaagagctagagaggcggcaa
cggaaacaagatcgacatcgacaacgagtacaggccattctgcaaaaatcctcggtgtcg
gtggagatcgaggtgagaccgagacaattagtgccagacacaaactgcttcatcgactac
ttaccgcagctgcagatcatcgcgagggccacttccggcgcgcaaccgatctacactctc
atggtgccacttgtcgtgctaaacgaactcgacggtctgacacggggcgccgatgcgaga
gattgtcctccagcatcgagggcgactctaaatcccgagcatgtggcgcgagttgccgag
agtgccaaggcggcactggccttcgcgaggagccgaaatccggcgatccggtgcgtaacc
acaagaggcaccgttctcccatccagcacctttacagcggaggaggatgtcgacaaggat
gaactgacacgcaacgatgacagaatattaactacgtgcctcaacctctgcaggagcaac
aaggatcaagcaaacacagcagaggaagggcaaccgcgacgtttgagacgggaggtggtc
ctgctcacggaagaccggaacctgagggtgaaggctctggccagggacgtacctgtgaga
gaagtgcccgattttatgcaatgggctgtattaggctga
DBGET
integrated database retrieval system
