Collimonas fungivorans: CFU_3708
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Entry
CFU_3708 CDS
T01583
Symbol
hlyD2
Name
(GenBank) secretion protein HlyD
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cfu
Collimonas fungivorans
Pathway
cfu01501
beta-Lactam resistance
cfu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFU_3708 (hlyD2)
01503 Cationic antimicrobial peptide (CAMP) resistance
CFU_3708 (hlyD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cfu03036
]
CFU_3708 (hlyD2)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfu02000
]
CFU_3708 (hlyD2)
01504 Antimicrobial resistance genes [BR:
cfu01504
]
CFU_3708 (hlyD2)
Chromosome and associated proteins [BR:
cfu03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CFU_3708 (hlyD2)
Transporters [BR:
cfu02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CFU_3708 (hlyD2)
Antimicrobial resistance genes [BR:
cfu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CFU_3708 (hlyD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
HH_YBHG
BSH_CzcB
BSH_RND
RND-MFP_C
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
BSH_YknX
HH_MFP_RND
Peptidase_M23
CzcB_C
BSH_Fcp1
DUF7864
Motif
Other DBs
NCBI-ProteinID:
AEK63532
UniProt:
G0ADJ0
LinkDB
All DBs
Position
complement(4339256..4340440)
Genome browser
AA seq
394 aa
AA seq
DB search
MKKPSFKQAAIVAAVVVIASGAFWATTSNHAKSGDKAGNKEAAKPKASLTVTTTKAQTVD
WPLSLTANGSIAAWQEAVVGSELGGLLLSEVRVNVGDVVKRGQVLARFTNESVAAQVAQQ
KAAVEEARAALSEADANAERARTLVNSGALSGQQTTQYEVAERSAKARLLSAQASLEMQQ
IRLRQTEVIAPDDGVISSRSATVGAVASQGQELFKLIRQSRLEWRAEVNATDLLQIKVGQ
AVKLRVTNGVLVDGKVRMIAPTVDPATRNALVYVDLPVPGSAHAGMFGTGQFLLGRAEAL
TLPQSAVVMRDGFSYVYQLGKDDKVIQTKVNLGRRVGERIEVVDGASSITPAMVLIEKGA
GFLADGDTVRVANPAANPAENKPVAANAAPLALK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagccatctttcaagcaagcagcaatcgtcgccgccgtggtcgtgatcgccagc
ggcgcgttctgggccactaccagcaaccacgccaaatcaggcgacaaggcgggcaacaag
gaagcggccaagccaaaggcctcgctcaccgtcaccaccaccaaggcgcaaaccgtcgac
tggccgctgtcgctgaccgccaacggcagcatcgccgcctggcaggaagccgtggtgggc
agcgagctgggcggcttgttgctgtcggaagtgcgggtcaatgtcggggatgtggtcaaa
cgcggccaggtgcttgcgcgctttaccaatgaaagcgtggcggcccaggtggcccagcaa
aaagccgcggtggaggaagcgcgcgcggctttgtcggaagccgacgccaacgccgagcgg
gcgcgcaccctggttaacagcggcgccttgagcggccagcaaaccacgcagtatgaagtg
gctgaacgcagcgccaaggcgcgtttgctgtcggcccaggccagcctggaaatgcagcag
atccggctgcgccagaccgaggtgatcgcgcctgacgacggtgtcatttcttcacgcagc
gcaaccgtcggtgcggtggcgtcgcagggccaggaactgttcaagctgatccgccagagc
cgcctcgaatggcgcgccgaagtcaacgctaccgacctgctgcagatcaaggtcgggcag
gcggtgaaactgcgtgtcaccaacggcgtgctggtcgacggcaaggtgcgcatgattgcg
ccgacggtggatccggctacccgcaacgcgctggtgtatgtcgacctgccggtgccgggc
agcgcccacgccggcatgttcggcaccggccagttcctgcttggccgcgccgaggcgctg
accttgccgcaaagcgcggtggtgatgcgcgacggtttcagttatgtctatcagctgggc
aaggacgataaagtcatccagaccaaggtcaacctgggacggcgtgtcggcgaacggatt
gaagtggtcgacggcgccagcagcatcacgccggccatggtgctgattgaaaagggcgcg
ggcttcctggccgacggcgacaccgtgcgcgtggcgaatccggccgcgaatccagccgaa
aataagccggtcgccgccaacgccgcgccgctggccttgaagtaa
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