Choristoneura fumiferana (eastern spruce budworm): 141430092
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Entry
141430092 CDS
T11020
Symbol
hoip
Name
(RefSeq) NHP2-like protein 1 hoip
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03008
Ribosome biogenesis in eukaryotes
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141430092 (hoip)
09122 Translation
03008 Ribosome biogenesis in eukaryotes
141430092 (hoip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141430092 (hoip)
03009 Ribosome biogenesis [BR:
cfum03009
]
141430092 (hoip)
Spliceosome [BR:
cfum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141430092 (hoip)
Ribosome biogenesis [BR:
cfum03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
141430092 (hoip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
141430092
NCBI-ProteinID:
XP_073946739
LinkDB
All DBs
Position
8:1398076..1398973
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AA seq
130 aa
AA seq
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MSEAEAAVNPKAYPLADAPLTAKMLNLVQQAANYKQLRKGANEATKTLNRGLAEFIVMAA
DAEPLEIVLHIPLLCEDKNVPYVFVRSKQALGRACGVSRPIVACSITINEGSQLKPQIQS
VQQEIERLLV
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccgaagccgcagtaaacccgaaagcgtaccctctggccgacgcgccattg
acggccaaaatgctgaacctggtccaacaagccgctaactacaagcagctgcgaaaaggc
gcaaacgaggccaccaagaccctcaacagaggcctcgctgagttcatagtcatggctgct
gatgccgagcccctagaaatcgttttacacattcctttgctgtgcgaggataagaatgtt
ccatatgtgtttgtgcggtcaaagcaagccctgggccgcgcctgtggggtctctcgcccc
atcgttgcctgctctatcactattaacgagggatcacagctcaagcctcagatccagagt
gtacagcaagaaattgaaagactattagtgtaa
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