Choristoneura fumiferana (eastern spruce budworm): 141431224
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Entry
141431224 CDS
T11020
Symbol
Kdm2
Name
(RefSeq) lysine demethylase 2
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141431224 (Kdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141431224 (Kdm2)
04121 Ubiquitin system [BR:
cfum04121
]
141431224 (Kdm2)
03036 Chromosome and associated proteins [BR:
cfum03036
]
141431224 (Kdm2)
Enzymes [BR:
cfum01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
141431224 (Kdm2)
Transcription factors [BR:
cfum03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
141431224 (Kdm2)
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141431224 (Kdm2)
Chromosome and associated proteins [BR:
cfum03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
141431224 (Kdm2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
141431224 (Kdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
Cupin_8
F-box
JHD
PHD
LRR_At5g56370
LRR_FBXL18
Rubredoxin
JmjC_2
Motif
Other DBs
NCBI-GeneID:
141431224
NCBI-ProteinID:
XP_073948401
LinkDB
All DBs
Position
9:complement(10495246..10531228)
Genome browser
AA seq
1021 aa
AA seq
DB search
MSETLPNTKKQLPRQLRERKQRKLYSDEWALGDDDVEGGRGFSLADKLESQRFDHPGSIH
EMFGTELTVSYLQKNGFTTPLLFKEKTGLGLRVPTSNFTVNDVRMCVGSRRLLDVMDVNT
QKNIEMTMKDWQRYYDDPNKERLLNVISLEFSHTRLENYVQAPRVVRLIDWVEVVWPRHL
KDQQTESTNALDDMMYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHILRGAKVFWLIPPT
EKNLQLYEKWVLSGKQSDVFFGDTVEKCIRVHLQAGHTFFIPTGWIHAVYTPSDSLVFGG
NFLHQFGIEKQLKIAQVEDVTKVPQKFRYPFFTEMLWYVLERYVSALLGRSHLAPEGQTP
PPSASREHVHLTQNELHGLKAIVMYLHQLPAARKSVPELLSDPIALVKDVRTLVEQHRHD
KQHLAITGVPVLKGPDEVVTGERRQSSGRGGRGGRGGGPARPRPEHANSAPRRRRTRCKK
CEACQRTDCGECVFCHDMVKFGGLGRAKQTCIMRQCLQPMLPVTASCAVCHLDGWLQTPV
APQAKGNSGRNGPSSLRECSVCYSIVHPACVPPGGQLNEDLPNSWECPTCTTMGLNHDYK
PRHFRARQKSSDLRRMSVGSDVSQLSREHNNLQKKALPPVPVKSEPSSDNEGKNDVPHIK
SESEIKREEDGSGEGGAGEPGEADWEPSAKKRRPSDEQEAPKKQALRAHLALQLTHHTAK
QLKKPLYPVRPAPLAGGALAGGAGAGAGAGSPWLDREAMLCVFARLTPHELATCALVCKC
WAEYSMDPSLWRSMSFVQVRVSAAQLAGIARRQPLSLGLEWCHLARRQLAWLLARLPALR
SLSLAGSPAEAALALRSSTCPPLTSLDLSFARCLDDAKLRGILAPPENSRPGGGNRTGAE
PSRLAALSVLRLPGTDITDVAMRYVVQALPKLVELDASSCARLTDAGAAQLAHHGLQRLS
LGGCRLLTEAALDHLARCPNLIRLDLRHVPLVSTQAVIKFAAKSKHNLHVQDVKLVELRK
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacactgccgaacaccaaaaaacaacttccaaggcaactgcgtgagcgcaag
caacgcaagctttactcagatgagtgggcccttggagatgacgatgtggaaggaggacga
gggttctccctcgctgacaagctggagagccagcggtttgaccaccctggctccatacat
gaaatgtttgggacggagctcacagtctcctaccttcagaagaatggattcactacccca
ttgctgttcaaggagaaaactggattgggattgagggtgccgaccagtaatttcacagtg
aacgatgtgcgcatgtgcgtgggctcgcgacgccttctagatgttatggatgtaaatacg
cagaaaaacatcgaaatgacaatgaaggactggcagcgttactacgatgatccgaacaag
gaaagacttctcaacgtgatatcgctagagttctcgcacacgcgcctcgagaattatgtg
caggcgccgcgggtcgtgcggcttatcgactgggtggaagtcgtgtggccgaggcatcta
aaggatcagcagactgaatccacgaacgccctggacgatatgatgtacccgaaggttcag
aaatactgcctcatgtcagtcaagggctgctacacagacttccacattgattttggtggg
acatctgtgtggtatcacatcttgagaggtgcgaaggtgttctggctcatacctcctaca
gagaagaatctccaactgtatgagaagtgggtactgtccgggaaacagtctgatgtgttc
ttcggagatactgtggaaaaatgcattcgagttcacctgcaagcgggccatacattcttc
atccccactggatggatacacgctgtgtacacgccgagcgactcgctagtcttcggcggc
aacttcctgcatcagtttggcatcgaaaaacaattgaaaatcgcacaagttgaagacgtc
actaaggtgccacagaaattccggtacccattcttcacggagatgctctggtacgtgctg
gagcgttacgtgagcgccctgttgggccgctcgcacctcgcgccggagggacagacgccg
ccgccgtccgcttcgcgcgaacacgtgcatcttacgcagaacgaactgcacggacttaag
gccatcgtgatgtacttacaccagttgccggcagcacgaaagtcagtgccagagctgttg
tccgaccccatagcgctcgtcaaagacgtgcggacattggtggagcaacatagacacgac
aaacaacatctggccatcacaggagtgcctgtgttgaaaggtccggatgaggtggtaacg
ggcgagcgccggcagtccagcgggcgaggcgggcgcggcggccgcggcggcggacccgcg
cggcctcgccccgaacacgccaacagcgcgccgcgtcgacgccgcaccagatgcaagaaa
tgtgaagcttgccagcggacagattgcggcgagtgcgtgttctgtcacgatatggttaag
tttggcggtttggggcgcgccaagcagacctgtattatgaggcagtgcttgcagccaatg
ttgccggttacagcttcttgcgcagtttgccatctcgatggttggctacagacgccagtc
gctcctcaagccaagggtaactctggtcgcaacggcccgtcgtccctccgcgagtgctct
gtgtgctacagcatcgtgcacccggcgtgcgtgccgcccggcgggcagctcaacgaggac
ctgcccaactcgtgggagtgccccacgtgcaccactatggggcttaatcatgattacaag
cctcgtcatttccgcgcgcgtcaaaaatcttcggatctcaggaggatgagcgtgggatca
gacgtcagccaactgagccgagagcataataatttacagaaaaaagcacttccgccagtg
ccagtcaaatcagaacccagctcggacaatgaagggaaaaatgatgttccacatatcaag
tctgaaagtgaaataaaacgcgaagaggatggttctggcgaaggcggtgcgggtgagccg
ggcgaggcagactgggagccgtccgccaagaagagacgtcccagcgacgaacaggaggcg
ccaaagaaacaggcgctgcgggcgcatttagctttgcagctaacacatcacacagctaag
caactaaagaagccgctgtacccggtgcgtccggcgccgctggcgggcggcgcgctggcg
ggcggcgcgggcgcgggcgcgggcgcgggctcgccctggctggaccgcgaggccatgctg
tgcgtgttcgcgcgcctcacgccgcacgagctcgccacctgcgcgctcgtctgcaagtgc
tgggccgagtattcgatggacccgtccctgtggcggagcatgtcgttcgttcaagtgcgc
gtgtccgcggcgcagctggccgggatcgcgcgccggcagcccctctcgctcggtctcgag
tggtgccatctcgcgagacgacaacttgcctggctactcgctcgtctgccagcgctccgt
tccctctccctcgcgggctcccccgccgaagcagccctcgccctccgctcctccacgtgt
ccccccctaacttccctcgacctatcgttcgcgcgttgcctcgacgacgcgaagttgcgc
ggcatcctcgcgccgcctgagaactcgcggcccggcgggggcaaccgcactggggctgag
ccgtctcgcctcgccgcgcttagtgtactgcgactgcccggtacagacatcaccgatgtc
gctatgagatacgttgtgcaggcgttgcccaagttggtggagctggatgcgtcctcgtgc
gcgcggctgacggacgcgggcgcggcgcagctggcgcaccacgggctgcagcggctgtcg
ctgggcggctgccggctgctcacagaggccgcgctcgaccatctggcgcgctgccccaac
ctcatcaggttggacctccgacacgtcccgctcgtatccacacaggcggtgatcaaattc
gccgccaagtccaaacataacctccacgtgcaagacgtgaagctagtcgagctgcggaaa
acctga
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integrated database retrieval system
