Choristoneura fumiferana (eastern spruce budworm): 141437919
Help
Entry
141437919 CDS
T11020
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141437919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfum02000
]
141437919
Transporters [BR:
cfum02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141437919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141437919
NCBI-ProteinID:
XP_073957601
LinkDB
All DBs
Position
18:complement(10615665..10617643)
Genome browser
AA seq
627 aa
AA seq
DB search
MFLDGDSDGQFYKNKLKRCWKNYNDYKLILWMWMLNDVSVVWAVTELSHSGYYIHASLHF
VAVIFVGIPVVYSEICLAQYTNCDVISMWDFFPLFRPIGYGTIYLVILKTIFMIVLTTWY
MVYTVHSALDPPPWFSCDEFTELHITNCMVKRINVSVFQHCIETQNLYGDDCGFKTASNC
FFEREIGNYTTVNWPQCIPKLKGMITTCSIGLILFILTLKHRFLAIGVKLVLLYLGIILF
VLFCVALSTSGTWYASKNTISWRSYNLNNCFITLARGFLSLGTGTGMITYLSRSTAFRSP
ATMTSITTPLLSIFITLMFSLIAFSGIKTMSYYHGEEENVIELGDNYFFAPFASITEIIS
YFDALPIWGFAWFSAILACLFVQLWLLFGYLRELFFSSFQWTRQYEKCATIVIISCLISL
ACPFFCSDITPALIDAVDIIQIFSSLVFSLTLYWFYGYYNHNVDIIFMIGVKASYFWKIT
WLLNPVILVLLFITKFSFFAIDDYENSYVIVDLEYPVNYLLFLIIIGIYAFIIILGMIFQ
VIFFYIKRHLKELIKPTNDWGPNDNVLFKSRKMFVPEIMTREFLYRQVKIHGYCRNKKKT
VVKEDFSANHESKENFHVKEWSALTSN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagatggggatagcgacggtcagttttataaaaataaattgaagagatgctgg
aaaaactataatgactacaaactaatattatggatgtggatgttaaatgacgtatccgtg
gtctgggctgtgacggaactatcacacagtggctattatatccatgcaagcttacatttt
gtcgcagttattttcgttgggatacctgtggtctactcagaaatctgcttagctcaatat
acaaattgcgacgtgatatcaatgtgggatttctttcctctttttcgcccaattggctac
ggaacaatctatttggtgatactcaagaccattttcatgatagtcctaactacatggtac
atggtgtatactgtccactcagcgctggatccaccgccgtggttttcgtgtgacgaattt
acggaattacatattacaaattgcatggtaaaaaggataaacgtttcagtttttcaacat
tgtatcgaaactcaaaacttgtatggtgatgactgtggattcaaaactgccagtaactgc
ttttttgaacgtgagattggaaactatacaacagttaattggccgcaatgtattcctaaa
ctgaaagggatgataactacctgctctatagggttaatcttgtttattttaactttaaaa
catagatttttggcaataggagtcaaacttgtgcttttatatttaggaataatcttattt
gttttgttttgtgtagccttgtctaccagtggtacttggtacgcgagcaaaaatacaatt
agttggagaagttacaatttaaataactgctttataacgcttgctaggggattccttagt
ctaggaacggggacaggtatgatcacctatttatcgagatccacagcatttcgcagtccc
gcaactatgacatctataacgacgccattactatccatattcataactcttatgtttagc
cttattgccttcagtggcataaaaacaatgtcttattatcacggagaggaggaaaacgtc
atagagctgggagataattacttctttgctccgtttgcttctattactgaaataataagt
tactttgatgctttgcccatttggggctttgcttggttttcagctatattggcatgctta
tttgttcaattatggcttctatttggttatttgagagaattattcttcagtagctttcag
tggacccgacagtatgaaaaatgcgccactattgtaattatatcatgtttgatttcgtta
gcttgtccatttttctgttcggatataacaccggctttaattgacgctgtggatataatc
caaatatttagtagcctagtattttctttaactctttattggttttacgggtattataat
cacaacgtcgatataatttttatgattggtgtaaaagcaagttatttctggaaaattact
tggttactaaatcctgtaatcttagtattgttgtttattacaaaattttccttttttgcg
atagatgattacgaaaactcatatgtgatcgtagatttagaatacccagtcaattattta
ttgtttcttataataattggtatttacgcattcattataatactaggtatgatatttcaa
gtaattttcttctacattaaaaggcacttgaaagaattaattaagccaacaaacgattgg
ggaccgaatgataatgtattattcaagagtagaaaaatgtttgtgcctgaaattatgacc
cgagaatttctatacaggcaagtgaaaatacacggatactgtagaaataagaagaaaact
gtagttaaggaagacttctccgctaaccatgagtctaaagaaaactttcatgtgaaggag
tggagtgccttaacctctaactag
DBGET
integrated database retrieval system
