KEGG   Choristoneura fumiferana (eastern spruce budworm): 141442676
Entry
141442676         CDS       T11020                                 
Symbol
Roc1a
Name
(RefSeq) regulator of cullins 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03420  Nucleotide excision repair
cfum04120  Ubiquitin mediated proteolysis
cfum04141  Protein processing in endoplasmic reticulum
cfum04310  Wnt signaling pathway
cfum04341  Hedgehog signaling pathway - fly
cfum04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    141442676 (Roc1a)
   04120 Ubiquitin mediated proteolysis
    141442676 (Roc1a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    141442676 (Roc1a)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    141442676 (Roc1a)
   04341 Hedgehog signaling pathway - fly
    141442676 (Roc1a)
   04350 TGF-beta signaling pathway
    141442676 (Roc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cfum04121]
    141442676 (Roc1a)
   03400 DNA repair and recombination proteins [BR:cfum03400]
    141442676 (Roc1a)
Enzymes [BR:cfum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     141442676 (Roc1a)
Ubiquitin system [BR:cfum04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   141442676 (Roc1a)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     141442676 (Roc1a)
   Cul2 complex
     141442676 (Roc1a)
   Cul3 complex
     141442676 (Roc1a)
   Cul4 complex
     141442676 (Roc1a)
   Cul7 complex
     141442676 (Roc1a)
   Cul8 complex
     141442676 (Roc1a)
   Cul9 complex
     141442676 (Roc1a)
DNA repair and recombination proteins [BR:cfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      141442676 (Roc1a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      141442676 (Roc1a)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 141442676
NCBI-ProteinID: XP_073963833
LinkDB
Position
2:complement(9399388..9402375)
AA seq 113 aa
MASAMDVDEEEVEMASCSSSKGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 342 nt   +upstreamnt  +downstreamnt
atggcttccgctatggatgttgatgaagaggaggtagaaatggcttcgtgtagcagcagc
aaaggtgataaaaaaagattcgaagtcaaaaagtggaatgccgttgctttatgggcttgg
gatattgtcgtggataactgcgctatctgccgtaatcacataatggatctgtgcatagaa
tgccaggccaaccaggcatctgccacaagtgaagagtgcacagtagcatggggagtctgc
aatcatgcattccacttccattgcatctcacgttggctgaagactcgccaagtatgtcct
ctagacaacagagagtgggagttccaaaagtatggtcattaa

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