Chryseobacterium gambrini: PFY09_05955
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Entry
PFY09_05955 CDS
T08920
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam01501
beta-Lactam resistance
cgam01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFY09_05955
01503 Cationic antimicrobial peptide (CAMP) resistance
PFY09_05955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgam03036
]
PFY09_05955
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgam02000
]
PFY09_05955
01504 Antimicrobial resistance genes [BR:
cgam01504
]
PFY09_05955
Chromosome and associated proteins [BR:
cgam03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PFY09_05955
Transporters [BR:
cgam02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PFY09_05955
Antimicrobial resistance genes [BR:
cgam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PFY09_05955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
RND-MFP_C
BSH_CzcB
CzcB_C
BSH_RND
Peptidase_M23
BSH_YknX
YqfD
Beta-barrel_YknX
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
WBV53863
LinkDB
All DBs
Position
complement(1353362..1354405)
Genome browser
AA seq
347 aa
AA seq
DB search
MTKKITTLLLLALLATSCKEEKKDLKPFSSSDVIAIKTADVGSMALASNISASGLVSTEN
ETTYSFKIGGVVSGIFVEEGQFFRKGQLLATLDETEIRSGLNQSDLNVQKYERDYKRATN
LYKDSVYTLEQVQNTKTGLDIARRQKDAVAFNVRYSKIYATADGFVSKKAANKGEIVGPG
SPVLIINETSNNNNYVLKVGLTDTEWASVKTGQKAVVTLDGYPDKTFDAFVFRKSQTADM
ALGSFQVELKLILNNSKPALGMFGKAEIKTDQSENFITVPYNSLIEADGNNAFVFVVQNN
KVKKRPITIARFEKDKVYVSGGLHKEDKIVISNSAYLNEQSTIKIIN
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaaataacaactcttctgcttttggcattgcttgccacgtcctgcaaagaa
gaaaaaaaagatttgaaaccattttcgtcctccgatgttattgcaataaaaacagcggat
gttggatcaatggctctggcttccaatatcagtgcatcgggtctggtatcaacagaaaat
gaaactacatattcctttaaaattggcggagtggtcagcggaatctttgtagaagaagga
cagttttttagaaaaggtcagcttttggcgactcttgacgaaacggaaatccgttcagga
ctcaaccagtcagaccttaatgttcagaaatacgaacgcgactataaacgtgccactaat
ctctataaagatagtgtttatactctggaacaagttcagaatacaaaaacgggtcttgat
attgcccgcagacagaaggatgctgttgccttcaacgtaagatattcaaaaatttatgca
acagcggatggatttgtttccaaaaaagcagccaataaaggtgaaatcgttggtcctgga
tcgcctgttttaattattaatgaaacaagtaataacaataattatgtattaaaagttgga
cttaccgacacagaatgggcttctgtaaagacaggacaaaaagcggtggttactttggat
gggtatcccgataaaacatttgatgcttttgtattcaggaaatcacagaccgccgatatg
gcactcgggtcttttcaggtagagcttaaactaattctgaataatagtaagcctgcatta
ggtatgtttggaaaagctgagattaagacagatcaatccgaaaattttatcactgtacct
tacaattctctgattgaagcggacggaaataacgcttttgtttttgtggtgcaaaacaac
aaagtaaaaaaaagacccattacgattgccagatttgagaaagataaagtctatgtaagt
ggcgggcttcataaagaggataagatcgtgatctccaatagtgcctatcttaacgagcag
tcaaccattaaaattatcaattaa
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