Clarias gariepinus (North African catfish): 128505532
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Entry
128505532 CDS
T10780
Name
(RefSeq) uncharacterized protein LOC128505532
KO
K16497
protocadherin gamma subfamily C
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Cell adhesion molecules [BR:
cgar04515
]
Cadherins
Protocadherins
128505532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128505532
NCBI-ProteinID:
XP_053332003
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Position
17:complement(1734393..1741081)
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AA seq
1695 aa
AA seq
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MFVRIDTLRINMRRKWWISGLLYAFSVWNITEAQIRYTIPEEQNEGTVVGNIAKDLDLKL
SDVFERNLQIAVESGKQYFGVDSTKGELVVRERIDRENLCQQMATCILPLEAILENPLQL
HRFEIEIQDINDNSPVFLKKENTLDIYESIASGARFRLESAQDPDVGSNSLRTYTLSKNE
YFALDVKIAKDGSRVPELVIEKSLDREKQSVISLTLTALDGGKPARSGTTKISISVLDTN
DNAPSFKKTQYDEQITENTTPGVVVLSVTAIDLDEGANKEVSYSFGPHTPDTVSNLFSVD
PANGEIKVKNTIDYETDQSFDFDIVARDKGSPPMEGVCSVHLDVLDINDNAPEIILKSSP
SPVREDAPSGTVVALISTKDLDKGDNGQVTLTLLPGTPFSLKTSLSNHYALITDQKLDRE
THSAYSVVIVASDSGSPQLTSKQEILVNVLDVNDNAPVFTQQSYVVHVKENSAAGSILCS
VSASDPDQGENAKVAYSILESRVLDAPLSSYIYINSDNGTIFSMHSFDHEKMKMFQIKVQ
AKDNGSPSLSSNATVHVFIVDQNDNTPAVIYPSALMGSVSHQRLPRSAKAGHLVTKVTAV
DADSGHNAWISYRLAEATDASLFTVSLHTGEVRTKRSVSEQDDSSQRLLIEIKDNGEPVQ
STTVTLDILIEDAFHEPISDFRHKNPEPDQKSSKITLYLMISLASVSFLCLVTFFVLLIK
CARSSRGSSTCCIRRSDGESKNHNRNLQIQLNTDGPIKYVEVLGGDMMSQSQSFGSYLSP
MSEFSDFTLVKPSSTTDFTNTLSVLDASLPDSTWTFESQQQSLARRDSVHNENSFRVSVL
GCRLWIRTNILTCNGFGNRMFIIIARMEMGALTWKSRYSRQMMWLLCLVWSTIEAQIRYS
IPEELKKGSVVGNIAKDLDLGLSEIYDRKLQIASESGKQYFGIDLGKGEIIITDRVDREQ
ICATIAKCTLTLEAIIENPLQMYRVEIDIQDVNDNSPFFLNNQIVVNVEEARVPGARFRL
ETAKDPDIGSNSLQSYVLSKNEYFVLSVKNKDGVKTPELVLEKALDREKLSTHNLVLTAV
DGGNPARSGTTALIVQVQDSNDNSPIFEKPTYKVKLPENTARETVILTVKAKDADEGANS
ELIYSFEPSTPTSIQNVFSIDQENGAITVKDYLDYESVSSFKFEVIASDKGASSLEGLCS
VEIEIVDVNDNVPEIILKSLPKPVREDAAPGTVVALIGAKDSDSGENGKVRLSIQPGLPF
TLKPSISNYYALVTDSNLDQETFPKYTVEIIAEDSGNPPLRSKTQISVEVLDVNDNPPVF
LQSSYVTYIKENVNAGNVVCTVSASDPDQGENAKISYSITESRIQGMSISSYFYINSDNG
SIFSMHSFDYERIKVFQIKVQAKDNGSPALSSNATVHVFIVDQNDNAPAVIYPSALMGSV
SHQRLPRSAKAGHLVTKVTAVDADSGHNAWISYRLAEATDASLFTVSLHTGEVRTKRSVS
EQDDSSQRLLIEIKDNGDSVQSTTVTLDILIEDAFHEPISDFRHKNPEPDQKSGKITLYL
MISLASVSFLCLVTFFVLLIKCARGSRGSSTCCIRRSDGESKNHNRNLQIQLNTDGPIKY
VEVLGGDMMSQSQSFGSYLSPMSEFSDFTLVKPSSTTDFTNTLSVLDASLPDSTWTFESQ
QVRGKAHMLYSIVLP
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgcgaatagatactttgaggataaatatgcgtagaaaatggtggatttccggg
ctgctctatgcgttttctgtgtggaatattaccgaggcgcagattcgttacacaatacca
gaagaacaaaacgagggcactgttgttggaaatatcgccaaagatctggatttaaaatta
tctgacgtctttgaacggaacttacagattgctgtcgagtctggaaagcagtatttcggc
gtagattcaacaaagggtgagctggtcgtgagggagagaattgacagggagaatttgtgc
caacaaatggctacatgtattctgcctttagaggctattttagaaaatccattgcaactg
catcgttttgaaatagaaattcaagacatcaatgacaattctccagttttccttaaaaaa
gaaaacactttggatatttatgaatcaatcgcgtctggtgcaaggtttcgtttagaatca
gcacaggatcctgatgtaggatcaaactcgctgcgcacttacacactgagcaaaaatgaa
tattttgcactagatgtaaaaatagctaaggatggatctcgtgtgccagagcttgtaata
gaaaaatctttggatagagaaaaacagtcagtaatcagtctcacgcttactgctttagat
ggcggaaaacctgcacgttctggcacaacaaaaatctccattagcgtacttgacacaaac
gataatgctccatcatttaaaaaaactcaatacgacgagcaaatcacagaaaacacgacc
ccaggagtggttgttcttagtgtaacagctatagatctagacgaaggcgcaaacaaagaa
gtgagttattcgtttggtcctcacaccccggacacggtaagcaacttgttttctgttgat
ccagccaatggtgagattaaagtaaaaaatacaatagattatgagaccgaccagtctttt
gattttgatattgtagccagagataaaggaagtcccccaatggagggtgtctgtagtgtg
catctggatgtattagatattaacgataacgcaccagagatcatattaaaatcctccccg
agtcctgtgcgggaagacgcccctagtggcacagtagtagctttaataagtactaaagac
ttagacaaaggtgataacggtcaggttactttgacgttattacctggcacgccattttcc
ttaaaaacatctttatcaaatcattacgctttaatcacagatcagaaactggacagagaa
acgcactctgcatattcggttgtgattgttgcatctgattcaggatcaccacagctcacg
tctaagcaagaaatacttgtaaatgttttagatgtaaatgataacgcacctgtttttacg
caacagtcatacgttgtgcacgttaaagaaaacagcgctgctggatcaatactgtgttcg
gtgtcggcttctgatccagatcagggagagaatgctaaagttgcttattctattttagag
tccagggtactcgacgcgccactatcatcttatatctatattaattcagacaacgggacc
atcttcagtatgcactcatttgatcacgaaaagatgaaaatgtttcagatcaaagtccag
gcgaaagataacggctctccgtctctgagcagcaacgccacggttcatgtttttattgtg
gaccagaacgacaacacccccgctgtcatttacccctctgcactcatgggctctgtctct
catcagaggttgccccgctccgctaaagcaggacacctcgttactaaagtcacagcagtg
gacgctgactcgggccataacgcctggatttcctatcggctagcggaggcgacggacgcg
tccctgttcactgtcagtttacacacaggagaggtgaggactaagcgctctgtgtcagag
caggatgactcctctcagagactgctcatagagataaaggacaacggagaaccggtgcag
tccaccacagtcacactggatatactgatagaggacgcctttcatgaaccaatctcagac
ttcagacacaaaaatccagaacctgatcagaaaagtagcaaaatcacattatatctcatg
atttctcttgcctccgtctcctttttatgtttggtgacatttttcgtattgttaataaaa
tgcgctcggagcagtagaggcagctcgacttgctgtatcagacggagcgatggtgagtct
aaaaaccacaacagaaacctgcagatccagctcaacactgacggacccattaaatatgtg
gaggtgctgggaggagacatgatgtctcagagtcagtcgttcggctcctatctctctcca
atgtccgaattcagtgatttcaccctcgttaaacccagcagcaccacagactttacaaac
actctaagcgtgctcgatgcgtcactaccggacagcacgtggacgtttgagagtcagcag
caaagcttagcccgacgggacagcgttcacaatgagaacagctttagagtcagcgttttg
ggatgccgattatggattaggacgaacattttaacttgtaatggttttggaaatcgaatg
tttatcatcatcgcacgcatggaaatgggagcgttgacatggaaatcgcgttattcacgg
caaatgatgtggcttttatgcctcgtttggagtacaatagaggcgcagattcgctactcc
attcccgaggaattaaaaaaggggtctgtggttggaaatatcgcaaaagatctggacctt
ggactttctgaaatatatgatcgtaaattacagatagcaagcgaatctggtaagcagtat
ttcggtattgatttggggaagggggagataataattacagacagagtcgacagggaacag
atatgcgctacaattgcgaagtgtacgttaacgctagaggcgataatagaaaacccttta
caaatgtatcgcgtggaaatagacatacaagatgtgaatgacaattcgccgttttttctt
aataatcaaatcgttgttaatgtagaggaggctagagtgccaggggcaagatttcgtttg
gaaacggcaaaagatccagatattgggtcaaattcgttacagtcgtacgtgctaagtaaa
aatgaatatttcgttttaagtgtgaaaaataaggacggtgttaaaacccctgaattagtt
ttagaaaaggctttggatagggaaaagctgtccacgcacaacctcgtgttgactgcagtg
gatggtgggaatccagcaaggtctggaacaacggcacttattgttcaggtgcaagacagt
aacgacaattctcctatttttgaaaagccaacatacaaggtgaaactgcctgaaaacacg
gcgcgagagacagttattctgacagttaaagccaaagacgcggacgaaggcgcaaatagc
gagctaatttattcatttgaaccgagcacgccgacgagcattcaaaatgtattctctatt
gaccaagaaaacggcgccatcacggtcaaagattatttagattatgaatcagtcagttcc
tttaaatttgaggtgatcgcttcagacaaaggggcttcgtctttagagggtctctgcagt
gtagagattgaaatagtagacgttaatgacaacgtgcccgagattattctgaaatctctt
cctaaaccagttagagaggatgcagccccaggtacagtagtggctctaataggagcaaag
gacagtgattccggtgaaaacggaaaggttagactgagcatacagccgggtttaccattc
acactaaaaccgtctatttcgaattattatgccttagtcacggattcaaatttagatcag
gaaacgttccctaaatacacggttgagattatagcagaagactccggaaatccaccgcta
cggtcaaaaactcaaatatctgttgaagtattagatgtaaatgataatcccccggtcttc
ttacaatcttcatatgtgacttatataaaagaaaacgttaatgccgggaatgtagtatgc
accgtatcagcttctgatccagatcaaggagaaaatgccaaaatttcatattcaattaca
gagtcgcgcattcagggcatgtcaatctcctcttacttttacataaattcagacaacgga
agcatcttcagtatgcactcgttcgactatgaaagaataaaagtgtttcagattaaagtc
caagcgaaagataacggctctccggctctgagcagcaacgccacggttcatgtttttatt
gtggaccagaacgacaacgcccccgctgtcatttacccctctgcactcatgggctctgtc
tctcatcagaggttgccccgctccgctaaagcaggacacctcgttactaaagtcacagca
gtggacgctgactcgggccataacgcctggatttcctatcggctagcggaggcgacggac
gcgtccctgttcactgtcagtttacacacaggagaggtgaggactaagcgctctgtgtca
gagcaggatgactcctctcagagactgctcatagaaataaaagacaacggagactcggtg
cagtccaccacagtcacactggatatactgatagaggacgcctttcatgaaccaatctca
gacttcagacacaaaaatccagaacctgatcagaaaagtggcaaaatcacattatatctc
atgatttctcttgcctccgtctcctttttgtgtttggtgacatttttcgtattgttaata
aaatgcgctcggggcagtagaggcagctcgacttgctgtatcagacggagcgatggtgag
tctaaaaaccacaacagaaacctgcagattcagctcaacactgacggacccattaaatat
gtggaggtgctgggaggagacatgatgtctcagagtcagtcgttcggctcctatctctct
ccaatgtccgaattcagtgatttcaccctcgttaaacccagcagcaccacagactttaca
aacactctaagcgtgctcgatgcgtcactaccggacagcacgtggacgtttgagagtcag
caggtgaggggaaaagcgcacatgttatatagcattgtcttaccttaa
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integrated database retrieval system
