Clarias gariepinus (North African catfish): 128505720
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Entry
128505720 CDS
T10780
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00280
Valine, leucine and isoleucine degradation
cgar00650
Butanoate metabolism
cgar00900
Terpenoid backbone biosynthesis
cgar01100
Metabolic pathways
cgar03320
PPAR signaling pathway
Module
cgar_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
128505720 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
128505720 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
128505720 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128505720 (hmgcs1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
128505720 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
128505720
NCBI-ProteinID:
XP_053332256
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Position
17:20168649..20180292
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AA seq
526 aa
AA seq
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MFVSSITMPGSLPASYSTTWPKDVGIIAMEVYIPSQYVDQAELEEFDGVGAGKYTIGLGQ
ARMGFCSDREDINSLCLTVVQRLIERNGLSYESVGRLEVGTETIIDKSKSVKTVLMQLFE
ESGNTDVEGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVTGDIAVYATGSARPTGG
AGAVAMLIGPNAPLAFDRGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIQAQWQRECVERRFSLNDFGYMVFHSPYCKLVQKSLARLLLNDFLAHPNPNMES
GPFSGLEAFRDVKAEDTYFDRDVEKAFMKASAEMFEQKTKASLLISNQNGNMYTPSVYGC
LASILAQFTPQQLAGQRIGLFSYGSGLAATLYSIRVTQDATPGSSLDKLVSSLSDIQARL
DSRKKVPPAVFADNMKLREETHHLANYIPQSTVDDLFPGTWYLTRVDEKHRRYYARRCLD
EHRHLEAGLLNSVTASEHIPSPVKKMPRIPATTAASETVSITNGEH
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtaagctcgatcacaatgcctggttctctccctgcgagctattcaaccacttgg
cccaaagatgttggcatcattgctatggaggtatacattccctcccagtatgtagaccag
gcagaactggaggagtttgatggagtaggagcagggaagtacaccatcggtctcgggcaa
gcgcggatgggtttctgctcggaccgagaggacattaactcgctgtgtctgactgtggtg
cagcgtcttatagagagaaatggcttgtcgtatgagagcgtgggaagacttgaggtgggc
acggagaccatcatcgacaaatcaaagtcggtgaagacagtactaatgcagttgtttgag
gaatcagggaatacagacgtggagggaatcgacacgactaacgcatgctatggtggcact
gctgctcttttcaatgctgttaactgggtggagtccagctcctgggacggtcgctacgct
ctggttgtgactggagatattgcggtttatgccacaggcagtgccaggcctacaggaggc
gctggagcagtagccatgttaatagggcctaatgcacctctggcatttgatagaggttta
cgagggacccatatgcaacatgcatatgatttttataagcctgacatggtgtctgagtat
cctgtagtggatggcaagctctccatccagtgctacctcagtgcattggacagatgttac
tctgtctaccgtaataaaattcaagcccaatggcaaagagagtgtgtggagagacgattc
agtctgaatgacttcggctacatggtcttccactctccctactgtaaattggttcagaag
tctctggctcgactcctgctgaacgacttcctggcccatcccaaccccaacatggagagt
gggccgttcagcggtcttgaagccttcagggatgtgaaggctgaggacacgtattttgac
cgtgatgtggaaaaggccttcatgaaagccagtgcagagatgtttgagcagaaaacaaag
gcctccttgcttatatccaaccagaatggcaacatgtacacaccatctgtgtatggctgt
ctggcttctattctggcacaatttacacctcagcagcttgcgggtcagagaattggcttg
ttctcatatggatcaggtcttgctgcaacactctattcaatcagagtgacacaagacgca
acacctggctcttcgctagataaactggtttccagtctttcagatattcaggcccgactg
gactcgaggaagaaggttccacctgccgtctttgcagacaacatgaagcttagagaggag
actcatcatttggcaaactacatccctcagagtacggtggacgacttgttcccaggaaca
tggtatctaacgcgcgtggatgagaaacaccgcaggtattatgccagacgttgcctggat
gaacatcgacatcttgaggcaggacttctaaattctgttaccgcatctgagcacatcccc
agccctgtgaagaagatgcctcgcatcccagccaccactgctgcctctgagacagtcagc
attaccaatggggagcattga
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