Clarias gariepinus (North African catfish): 128507503
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Entry
128507503 CDS
T10780
Symbol
trpc5a
Name
(RefSeq) short transient receptor potential channel 5a
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128507503 (trpc5a)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128507503 (trpc5a)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128507503 (trpc5a)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128507503 (trpc5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128507503
NCBI-ProteinID:
XP_053334451
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All DBs
Position
19:16611815..16666160
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AA seq
1019 aa
AA seq
DB search
MNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLSAVEKGDYAGVKMALEQAEI
YYNINVNCLDPLGRSALLIAIENENLEVMELLLSHGVHVGDAFLYAIRKEVVGAVELLLS
YRKPSGEKQVPAFMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTVPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDHSEELDPRECRDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLITCFTIGLLFPVFSIIYLLAPKSTLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIVQTDLHVQGPPPTIVEWMILPWVLGFIWA
EIKEMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKMVAYFKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETEAAEEPNHCKGIRCEKQNNAFSTFFETLQSLFWSVFGLLSLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSMWYLCVWLHSHFCGEEQPTPEEQHKHDNLKEFTERHADSLIQNQQYQE
VIKNLVKRYVAAMIRRTKTDEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSS
EATQPEAEQDDDEEDTQKRNRGARHGRNAQSSSISFGQADKRKRDGQFTVTALFRSMAGL
EDLDDGPKSNGLKKNRWSPSSFMRTSGRLRHFPRSKKNSLRRLGSLFRRVNGHIVESHLR
SPKQQQTFSISDGVLQPPTSWQDPQAQPENWLTRSSMHLHTLEGESGARHKNQTQSGPQQ
AKDADNLLLRPPGLHCASSLTASSSLLLSSSEDLCQGLPGPCESLDSYWEQEDSITTQL
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatggcgcagctgtactacaagaaggcgagctattcgccgtaccgtgaccgg
ataccactgcagattgtgcgggctgaggctgagctgtcagcagaggagcgtgcctaccta
agtgcagtggagaagggggactatgcaggtgtaaagatggcccttgaacaggcagagatc
tactacaatattaatgttaactgcctggacccgctaggacgcagtgcccttctaattgca
attgagaatgagaatctggaggtaatggagctgctgctgagtcatggtgtacatgtggga
gatgcttttctctacgccatccgcaaggaggtggtgggtgcagtggaactgctactatcc
tacaggaaacccagtggtgaaaaacaggtacctgcatttatgatggacacccagttctca
gaattcacacctgatatcacgcccatcatgctggctgcacacaccaacaattacgagatc
atcaaactacttgttcagcgcaaggtcaccgtgccacggccacaccaaatccgctgtgac
tgcgtcgaatgtgtatccagctcagaggtggatagtctgcgacactcacgttcccgactt
aacatctacaagacactggcaagtccttccctcattgctttgtccagcgaggatcctatc
ctcacagcgttccgtctaggatgggagctgaaggagctcagcaaggtggagaatgaattt
cggcaggagtatgaggagttgtcacagcaatgcaagctttttgctaaagacttactggac
caagcaagaagttcacgtgagctagagactatccttaaccatcgtgatgaccacagtgaa
gagctggaccctcgagaatgcagagacctcgccaagctcaagctggcaatcaagtaccac
cagaaagagtttgtggctcagccaaactgccagcagctactggccacgctgtggtatgat
ggcttccctggatggcggcgacgtcactgggtggtgaagttgatcacatgtttcacaatt
ggcctacttttccctgtcttttccatcatctacctactggcaccaaagagcacacttggt
ctttttatcaagaaacccttcataaaattcatctgtcatactgcgtcatacttgaccttc
ctcttcctcctgctcttggcctcacagcacattgtgcaaactgacctacatgttcagggt
ccacctcccaccatcgtggaatggatgatcttaccctgggttctgggctttatttgggct
gagatcaaagaaatgtgggatggaggctttaatgaatatgttcatgattggtggaacctg
atggactttgctatgaactctctctacctagccaccatatctctcaagatggtggcctac
tttaagtacaacagctcccgtcctcgtgaagagtgggagatgtggcacccaacactaatt
gcagaggcgttgtttgccattgccaacatcttcagttcgcttcggctcatctcacttttc
acagccaattcgcacctgggcccattgcagatctcactgggcagaatgttgcttgatatc
ctcaagttcctcttcatttattgcctggtgcttttggcttttgcaaatggtcttaaccag
ctctatttctactatgaaactgaagcagctgaagagccaaaccactgcaaaggcatccgc
tgtgagaagcaaaacaatgctttctccacgttttttgagacacttcagtcactcttctgg
tctgtgtttggtctgctcagcctgtatgtaaccaacgtcaaagctcggcatgagttcact
gaatttgttggtgccacaatgttcggcacttacaacgtcatctctctggtggtgctgctt
aacatgctcatagctatgatgaacaattcctatcaactcattgccgatcacgctgatatt
gagtggaagtttgcccgcaccaagctgtggatgagctactttgatgagggagggacactt
ccgccgccattcaatattattcccagtcccaagtcgatgtggtacctgtgtgtatggctg
cacagccatttttgtggtgaagaacagcctactcctgaggagcagcacaaacacgacaac
ctcaaagagttcacggaacggcacgctgacagcctcattcagaaccagcagtatcaggaa
gtgattaaaaatctggtgaagcgatatgtggccgccatgatccgcagaaccaaaactgac
gaagggctgactgaagaaaactttaaggagctgaaacaggacatctcaagtttccgttat
gaggtcctggacctgctgggcaaccgcaagccaccacgccgcacatactcctcaagcagt
gaggccacacaacctgaagctgagcaagatgatgatgaggaagacacacagaagaggaac
agaggagcaaggcatggaagaaatgcacagtcaagttccatttcatttggccaagcagac
aagagaaagcgtgatggccagtttaccgttacagctcttttccgttctatggcaggtctt
gaggatttagatgatgggccaaaaagcaatgggttgaagaaaaacaggtggtctccttca
tctttcatgaggacaagtggtcgcttgcggcacttcccacgctcaaagaaaaactcactg
cgccgtttgggatcactctttcgtcgtgtgaatggacacattgttgagtcacacctgagg
agtcctaaacagcaacaaacctttagcatttcagatggagttttgcaacccccaacatcc
tggcaggacccccaagcacagccagaaaactggcttacaagaagcagcatgcacttgcac
acgcttgaaggagaatctggtgcaagacacaagaatcaaacacagtcagggccccagcag
gcaaaggacgcagacaacctcctgctgaggccccctggcctacactgtgcttccagtctg
actgcgtccagttcccttttgctttcgtccagtgaggatctgtgtcagggtttgccaggg
ccctgtgagagccttgactcctattgggaacaggaggactcaatcaccacacaactctaa
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