Clarias gariepinus (North African catfish): 128508164
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Entry
128508164 CDS
T10780
Symbol
gria2a
Name
(RefSeq) glutamate receptor 2a isoform X1
KO
K05198
glutamate receptor 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128508164 (gria2a)
04082 Neuroactive ligand signaling
128508164 (gria2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128508164 (gria2a)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Glutamate (ionotropic)
128508164 (gria2a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
128508164
NCBI-ProteinID:
XP_053335348
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All DBs
Position
20:4634281..4674634
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AA seq
895 aa
AA seq
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MMNLSGFLFVPALWGLALGGSPSVQIGGLFPRGADQEYSAFRVGMVQFGTAEFRLTPHID
NLEVANSFAITNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFITPSFPADGLNQ
FVLQMRPDIRGPLISLVEYYKWEKFAYLYDSDRGLSTLQAVLDTAAEKKWQVTAINVGNL
KDERKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFGFL
DGDLSKIQYGGANVSGFQIVDFDDPLVAKFDQRWEALEEKEYPGADSKIRYTSALTYDAV
QVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFDQ
YGKRVNFSVNIMELKNSGPVKIGYWKEVDKMVVTKSDLFPNDTFGMENKTVIVTTILEAP
YVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDADTKIWNGMV
GELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE
IWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGQLGPSESNNEFGIFNSLWFSLGAFM
QQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEI
AYGTLDAGSTKEFFKRSKIALFEKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLLE
STMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQGLLDKLKNK
WWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEAKRM
KMTFTEAMRTKARLSITGSIGENGRVLTPDFSKAVHAVPYMRPGMAMPLNVSELS
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttgtcgggttttctgtttgtccccgcgttatggggactcgctctcggcgga
tcaccaagcgtccaaatcggcggcctgtttccgcgcggtgcggatcaggagtacagcgcg
tttcgggtcgggatggtgcagttcggcacggctgagttccgcctcacgccgcacatcgac
aacctggaggtggccaacagcttcgccatcaccaactgcttttgttcgcagttttcccgg
ggcgtgtacgccatcttcgggttctacgacaagaaatccgtaaacaccatcacgtcgttc
tgcgagacgctgcacgtgtccttcatcacgccgagtttccccgccgacggcctcaaccag
ttcgtgctgcagatgagacctgacatccgcggccctctgatcagcctggtcgagtactac
aagtgggagaagtttgcgtatctctacgacagcgatagaggcttgtccaccctgcaagcc
gtcctggacactgcagctgagaagaaatggcaggtgacggctatcaacgtgggcaacctg
aaggacgagcggaaagacgaggcgtaccgctcgctcttccaggacctggagaacaaaaaa
gagaggagggtcatcctggactgcgagcaggacaaggtcaaagacatcatggagcaggtt
atcacgatcggtcgtcatgtgaaaggatatcattacataattgctaattttggctttctg
gacggagatctttcgaagattcagtacggaggcgcaaatgtgtccggctttcagatcgtg
gatttcgacgaccctctcgtcgctaagtttgaccagcgctgggaggcactagaggagaag
gagtacccaggggcggacagcaagatccgttacacttcggctttgacgtacgacgcggtt
caagtgatgaccgaagcgttccgcttcctgcacaagcaaaggatcgacatcagtcgccgt
ggcaacaacggagactgcctggccaatccggctgtaccgtgggctcagggagtggagata
gaacgtgctcttaaacaggtgcgagtggacggactgacaggaaacatccagttcgaccaa
tacggcaagagagtgaacttctctgtcaacatcatggagctgaaaaacagcggtccagta
aagatcggctactggaaagaggtggacaaaatggtggtcaccaaatctgacctcttcccc
aacgacacctttgggatggagaacaagacggttattgtgacgaccatcttggaggcgccg
tatgtgatgttgaagaagaacgcagagttgttcacggataatgaacgctatgagggatac
tgcgtggacttggccgctgagatcgcaaagcattgtgggtttaagtatcagctgaagatt
gtgggagacgggaagtacggcgcaagagacgcagatacgaagatctggaacggcatggtt
ggcgaattggtgtatgggaaagcagacattgctgtagcgcctctcacgatcacactggtt
cgtgaagaagtgattgacttctccaaaccctttatgagcctgggaatctccatcatgatc
aagaagccgcagaaatcaaagccaggcgtcttctccttcctggaccctctggcttacgag
atctggatgtgcatcgtgttcgcgtacatcggtgtcagcgttgtgctcttccttgttagc
cgcttcagcccatacgagtggcacaccgaggagttcgaagatggccagcttggccccagc
gagtccaataacgaatttgggatctttaatagtctttggttttctctgggcgcttttatg
cagcagggatgcgatatttcgccaaggtcactttctgggcgtatagttggtggtgtttgg
tggttcttcacccttatcatcatctcttcttacacggctaacctggctgctttcctcacc
gtggagaggatggtgtcccccattgagagcgccgaagatcttgcaaagcaaaccgaaata
gcctacggaaccctcgacgccggttcaaccaaagagttcttcaagagatcaaagatcgcc
ctgtttgagaagatgtggcagtacatgaaaagcgccgagccttccgtctttgtaaagaac
acggtggaaggcgtgctgcgtgtgcgcaagtcaaagggcaaatacgcttacctgctagag
tccaccatgaacgagtacatcgagcagcgcaagccgtgtgacaccatgaaggtcggaggc
aatctcgactccaagggctacggcatcgccacgcccaaaggatctgctttaagaaacgcg
gtaaacctcgcggtgctaaaactgaacgagcaggggcttctggataaattgaaaaacaaa
tggtggtacgacaaaggagagtgcggcagcggaggcggggagtcaaaggagaagacaagc
gctctgagtttaagcaacgtggcgggggtcttctacatcctggtgggcggcctcggcctg
gccatgctggtggcgctggtggaattctgctacaagtcgcgtgccgaggccaagcgcatg
aagatgacgttcaccgaggccatgcgcactaaggcaaggctgtctataactggcagtatt
ggggagaacgggagagtgctgactccggatttctctaaagccgtgcacgctgtgccctac
atgagaccaggcatggcaatgcctcttaacgtgagcgagctgtcctga
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