Clarias gariepinus (North African catfish): 128508946
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Entry
128508946 CDS
T10780
Symbol
polk
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128508946 (polk)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128508946 (polk)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128508946 (polk)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
128508946 (polk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
128508946
NCBI-ProteinID:
XP_053336406
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All DBs
Position
21:complement(18278199..18287247)
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AA seq
913 aa
AA seq
DB search
MESSGSRGQDSILSRVALNDNKAGMQGLDKDKINKIILETSKGSRFYENELKKERQVNQR
IEKMMRYKAKVTEQQIQKAQVEVDKLTAILERSRELERIIVHVDMDAFYAAVEMRECPEL
KDKPMAVGSMSMLSTSNYLARRYGVRAAMPGFIAKKLCPELVIVPLNFDKYRAVSEQVRE
IFADYDPQFLPMSLDEAYLDITEHLEQRQHWPESMRTHQICEVKPTEEIPEPEANVGAET
ETLSPVLFEDSPSSSPMIPGAVGRVEVFGTSPEEAVREMRFRIEQKTTLTASAGIAPNMM
LAKVCSDKNKPNGQYRILPDRQAVMDFIQELPVRKVSGIGKVTETMLAALGIVSCSQLRQ
QMAMLSLLFSETTWHHFLQISLGLGSTHISRDSERKSMSTERTFAEMSDAHEQYSLCKEL
CHELAKDLQREGLKGKTVTLKLKNVNFEVKTRAFTLQCAVCTEEEIYAAAKDILKAEMDN
VSPQPLRLRLMGVRVSSFINIEDKQPQQKSIVGFLKIASDCGSSVQPPKLEIVSALGSSA
TSANEQCLETSKRFSKWRTESGSTTEPQQQTFFQKAHAKRLQKQFEREGTSGPHSDKIFK
CSPTDSDTTNNIVTTHNATVIREETQTSTWVRHPDTDETAAKVESSLSTTKTESCVTETK
PQSASMLQCFTCPVCFNQIKTKNLASFNHHIDTCLSSEVDNKSTSMEGYQEGKLLSKQGE
TRKDHTRQKVTDMSSERRTCDDEEPCTSSSTLFFEKDDSDFRTPFFKRFKSTSKKRSLLL
CDPMSDSRAAPFQQTAGSVDVISEPIDKQSSTLICPVCNQAQDTDDLTLFNHHVDMCLNQ
EVLLEFRQAVPSVAQSGHGLMDSLVQISDKEKHSAAKGKSKRRGSSPPPPSKKTKAVATK
HTIDKFFKGNKQQ
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgagtgggagcagaggacaggacagcatcctctccagagtggctctcaatgat
aacaaggcaggcatgcaaggtctcgacaaggacaaaatcaacaagattattctcgaaacg
tccaagggatccagattttatgagaatgaactgaaaaaggagcgtcaggtgaaccagcgt
atcgagaagatgatgcgatataaagccaaggttactgagcagcagatacagaaagcgcaa
gtagaggtggacaagctgactgccatcctggaaaggagtcgcgagcttgagagaataatt
gtgcatgttgatatggatgcattctatgctgctgtggagatgagagaatgtccagaatta
aaagataaacccatggctgtgggatccatgagcatgttgtctacttcaaactaccttgcc
agaaggtacggtgtccgtgctgccatgccaggcttcattgctaagaaactctgcccagag
ctggtcattgtgccattaaactttgacaaatacagagcagtgagtgaacaggtgagggag
atatttgcagactatgatcctcagtttttgcccatgagtttagatgaagcttatttggac
atcaccgagcatctggagcagaggcagcactggcctgagtctatgagaacacatcagatc
tgtgaagtgaaacccacagaagagatcccagaacctgaggccaatgttggagcagagacg
gaaacattgtcccctgtgctctttgaggacagcccaagttcctcccctatgatcccaggg
gctgttgggagggtggaagtatttgggacaagtcccgaagaagctgtgagagaaatgcgc
tttcgtattgagcagaaaacgacactgactgcaagtgctggtatcgcaccgaacatgatg
ctcgcaaaagtgtgcagtgataagaacaagcccaatggtcaatacagaattcttcctgac
agacaggctgtgatggacttcatccaagagctgccagttcggaaggtttctgggatcggg
aaagtgacagaaacgatgctcgctgcgttaggaattgtcagttgttcccagctcagacag
cagatggcgatgctttctttgcttttctctgaaacaacctggcaccatttccttcaaatt
tcactcggacttggctctactcacataagcagagattctgagagaaaaagcatgagcaca
gaaaggacgtttgcggagatgagcgatgcgcacgagcagtactcactgtgcaaggagctc
tgtcatgagttggcaaaggacctacagagggagggcctcaagggtaaaactgtcacactg
aaactaaagaatgtcaactttgaggtgaagaccagagcattcacattgcagtgtgctgtg
tgcaccgaagaggagatttatgctgccgctaaggacattttgaaagctgagatggataat
gtcagccctcaacccctgaggctgagattaatgggtgttcgtgtctcaagtttcatcaat
attgaagataaacagccccagcagaaaagcattgtgggctttttgaagatcgcatcagat
tgtggcagttcagtccagccacccaaattagaaatagtcagtgctttgggttctagtgcc
acttcagcaaacgagcagtgtcttgaaacatccaaacgattcagtaagtggcggacagaa
tctggctccacaactgaacctcagcagcagaccttcttccaaaaggcccatgctaagagg
ctgcaaaaacaatttgaacgagaaggaacatctggaccacactcagacaaaatatttaaa
tgctcacctacggactctgacactacaaataacattgtcacaacccacaatgcaacagtc
ataagagaagaaactcagacaagcacatgggtgagacatccagatacagatgaaactgca
gccaaagtggaatcaagtttgtccacgacaaagacagaatcatgtgtaaccgaaacaaaa
ccacagtctgcaagtatgctgcagtgtttcacatgtcctgtgtgcttcaatcagattaaa
acgaaaaaccttgcatcgttcaaccaccatatagacacgtgtcttagcagtgaagtggac
aataaaagcacgtccatggaaggatatcaggaaggaaaactattaagcaagcagggtgaa
acaaggaaagatcacactcgtcaaaaagtcacagacatgagctcagaaaggaggacgtgc
gatgatgaagaaccgtgcaccagctcctccaccctgttttttgaaaaagacgattctgat
tttagaacaccattttttaaacgctttaaaagtacaagtaaaaagcgttctctcttgctg
tgcgatcccatgagcgattccagagctgcgcccttccaacagacggctggttctgttgat
gttattagtgaaccaatagacaagcagtcctccacattaatatgtccagtatgcaatcag
gctcaggatactgatgaccttactctcttcaaccatcatgtcgacatgtgtctcaaccag
gaggtgcttttagagtttagacaggctgttccttcagtggctcagtcaggccatggctta
atggattcattggttcagatctcggataaggagaaacactctgctgcaaaaggaaaaagc
aaaagacgaggatcatcacctcctcctccttcaaagaaaaccaaagccgtcgctacaaaa
cataccattgataaattcttcaagggaaacaagcaacagtaa
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