Clarias gariepinus (North African catfish): 128509190
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Entry
128509190 CDS
T10780
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04145
Phagosome
cgar04218
Cellular senescence
cgar04514
Cell adhesion molecules
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128509190
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128509190
04145 Phagosome
128509190
09143 Cell growth and death
04218 Cellular senescence
128509190
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128509190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128509190
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128509190
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128509190
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Antigens
128509190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
I-set
MHC_II_beta
Ig_3
MHC_I_3
Psg1
Podoplanin
C2-set_2
Motif
Other DBs
NCBI-GeneID:
128509190
NCBI-ProteinID:
XP_053336789
LinkDB
All DBs
Position
21:2875432..2921110
Genome browser
AA seq
351 aa
AA seq
DB search
MGRGSAVIKTLVFLTFSLHLSSAVTHTLQYVNTAVTPGINFPEFTSVGQVDGQEFVYYDS
KISKVIARTEWIQKVTDDDPQYWNRNTQILQSLQEIFKVDMAIAMQRFNQTKGVHTFQRM
YGCELDDDGTTRGYSQFGYDGEDFMTFDLKTLTWTAPTPQALITKNKWDPDTGYNKGTED
YLKNECIEWLMKYLTYGRETQRRKDRPEVSVFQKHSSSPEVVCHATGFFPKTVMINWQKD
GEDVREDVDLRETLHNQDGSFQIRSILRVPAEALQKHKYTCVVQHITGEIRKDVPKGGGS
IGVIIAVVAALVALAVIGVIAGIVVWKKKNSGFKPVPPKPSSEGDSSSNNS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcagtgcagttataaaaactctggttttcctcacattttctcttcatctt
tcatcagctgtcacacacactctgcagtacgtcaacactgcagtgacaccaggaataaat
ttcccagaattcacctctgtgggtcaggtggatggacaggagtttgtgtactatgacagt
aagatcagtaaggtgatcgcaaggacagagtggatacagaaggtcaccgatgatgatcca
caatattggaacagaaacacacaaattttacagagtttgcaggagatcttcaaagttgat
atggctatagcaatgcagcgctttaatcagacaaaaggagttcacacatttcagaggatg
tatggctgtgagctggatgatgacggcaccactagaggatacagccagttcggttatgat
ggagaagattttatgacctttgatctgaagactctgacctggaccgctccgacacctcag
gcactgatcaccaagaacaagtgggatcctgatactggatataataagggcacagaggac
tacctgaagaacgagtgtattgagtggttaatgaagtacctgacttacggcagagagact
cagaggagaaaagatcgtcctgaggtgtcagtgttccagaaacactcgtcttccccagag
gtggtgtgtcatgctacaggtttcttccccaaaacagtgatgatcaactggcagaaagac
ggagaggacgtgcgtgaggacgtggacctcagagagacgttacataaccaggatggaagc
ttccagataagaagcattctgagagtcccagctgaggcgctgcagaaacacaaatacacc
tgcgtggttcagcacatcacaggggagattcgaaaagacgtcccaaaaggtggaggatcg
attggtgtcatcatcgctgtagtcgcggctctcgtcgctcttgccgttatcggggttatt
gctggaattgtggtctggaagaagaagaactctggcttcaaacctgttccacccaaaccc
tcctctgaaggagattcttcctccaacaactcttaa
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