Clarias gariepinus (North African catfish): 128509413
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Entry
128509413 CDS
T10780
Name
(RefSeq) BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X1
KO
K06751
MHC class I antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04145
Phagosome
cgar04218
Cellular senescence
cgar04514
Cell adhesion molecules
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128509413
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128509413
04145 Phagosome
128509413
09143 Cell growth and death
04218 Cellular senescence
128509413
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128509413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128509413
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128509413
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128509413
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Antigens
128509413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
Ig_3
C2-set_2
Motif
Other DBs
NCBI-GeneID:
128509413
NCBI-ProteinID:
XP_053337123
LinkDB
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Position
21:complement(4963584..4972845)
Genome browser
AA seq
375 aa
AA seq
DB search
MDADDNAVLKLLLLISCVHPSSADTHTLQYLYTTVTPGLTDFPEFTAVGLLDGEQFMSYS
SNNRSLIIKDSIKKTNSETYWRRETQDMWGNQHIFTNTFTTAMKKFHHSNGVHTLQRMFG
CERDDDDDVTTGGYDQYGYDGEDFISLNLTTGTWTAVKPQAVTIKHTWESKGSNKHWKNF
LERECIDLLKTYTSNSRDTLNRKVRPEVSVFQKRSPSPEVVCHATGFFPKPLNITWQKDG
EDEHEGVELRETLPNQDGSFQKRIILKVSRMKLWIHNYTCVVQHSSLEKELVREVPKGGG
SGGRSDGALIAIITAVVAALLAVVVGIVVWKKKNSAHEGDSSFNNSKTVSVYRPAELRER
HEEGEMRTEFTEDHT
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgatgacaacgccgtactaaaacttctgcttttaatctcatgtgttcatcct
tcatcagcagacacacacactctgcagtacctctacactacagtcacacctggacttact
gatttcccagagttcactgctgtgggtctgctggacggagagcagtttatgtcctacagc
agcaacaacaggagtctgatcataaaggactcgataaagaagactaacagtgagacctac
tggagaagagagacacaggacatgtggggcaatcagcacatctttaccaacacattcaca
acggcaatgaagaagtttcatcatagtaacggagttcacacactacagaggatgttcggc
tgtgagcgtgatgatgatgatgatgtcaccacaggaggatacgatcagtacggttatgat
ggagaagatttcatcagtctgaatctgacaactggaacctggactgcagttaaacctcaa
gctgtaacaatcaaacacacctgggagtctaaaggttctaataaacactggaagaacttc
ctggagcgtgagtgtatcgatctgttaaagacctacacgtctaacagcagagacactctg
aacagaaaagttcgtcccgaggtctcagtgttccagaaacgctctccttctccagaggtg
gtgtgtcacgctacaggtttcttccccaaaccactaaacatcacctggcagaaggacgga
gaggacgagcatgagggcgtggagctcagagagacgttacccaaccaggatggaagcttc
cagaagagaatcattctgaaagtctcaagaatgaagctgtggatacacaactacacctgc
gtggttcagcacagcagcttggagaaggagttagtgcgagaagtaccaaaaggtggagga
tcaggtggaagatcagatggagcactgattgctatcatcactgctgtagtcgcagctctc
ctcgctgttgtcgttggaattgtggtctggaagaagaagaactctgctcatgaaggagat
tcttccttcaacaactctaagactgtgtctgtgtatcgtcctgctgaactgagagagaga
cacgaggagggcgagatgaggacagagtttacagaggaccacacatga
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