Clarias gariepinus (North African catfish): 128509417
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Entry
128509417 CDS
T10780
Name
(RefSeq) BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X1
KO
K06751
MHC class I antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04145
Phagosome
cgar04218
Cellular senescence
cgar04514
Cell adhesion molecules
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128509417
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128509417
04145 Phagosome
128509417
09143 Cell growth and death
04218 Cellular senescence
128509417
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128509417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128509417
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128509417
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128509417
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Antigens
128509417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
Ig_3
C2-set_2
Ig_2
MHC_I_3
I-set
DUF4854
DUF2111
Motif
Other DBs
NCBI-GeneID:
128509417
NCBI-ProteinID:
XP_053337128
LinkDB
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Position
21:complement(4517263..4523433)
Genome browser
AA seq
356 aa
AA seq
DB search
MERTGLMNIIFTACLLYGSADAQTQVKVPLQYLYTAVTPGIYFPEFTAVGLLDGEQFMSY
SSSHRTLILKAWIKKIEGEVYWQSVTKELENNEDHYKSTFTRLMKELNHSKGVDTLQRMY
GCEQNGDGTTRGYDHYAYDGDDFISLNLTTETWSAANAKALNTKHKWESDSVYTKYWKNY
LESTCTDSLMKYGKETLKRKVRPEVSVFHRHLSPSPEVVCHATGFFPKPLNITWQKDGED
VGEDVELRETLPNQDGSFQKRSILKVPAEELQKHTYTCVVQHSSLEKELVREVPKGGRSA
GVRIAIITPVVAAFVTVVSGIVIWKKKNSGERRKEADGKFLKNRFTLSNSFCFCLS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggagcggaccgggctgatgaacatcatctttacagcgtgtttactgtacggatccgca
gatgcacaaactcaagtaaaagtacctctgcagtacctctacactgcagtcacaccagga
atctatttcccagagttcactgctgtaggtctgctggacggagagcagtttatgtcctac
agcagcagccacaggacgctgatcctgaaggcctggataaagaagattgagggtgaagtg
tattggcagagtgtgacaaaggaactggagaacaatgaggatcattataagagcacattc
acaagattaatgaaagaactgaatcatagtaaaggtgttgatacactacagaggatgtac
ggctgtgagcagaatggtgacggcaccactagaggatacgatcattacgcttacgatgga
gacgacttcatcagtctgaacctgacaacagaaacctggagcgcagctaatgctaaagct
ctgaacaccaaacacaagtgggagtctgatagtgtttataccaaatactggaagaactac
ctggagagcacgtgtactgacagtttaatgaagtatggcaaagagacactgaagaggaaa
gttcgtcctgaggtgtcagtgtttcatagacacttgtctccttctccagaggtggtgtgt
cacgctacaggtttcttccccaaaccactaaatatcacctggcaaaaggacggagaggac
gtgggtgaggacgtggagctcagagagacgttacccaaccaggatggaagcttccagaag
agaagcattctgaaagtcccagctgaggagctgcagaaacacacctacacctgcgtggtt
cagcacagcagcttggagaaggagttagtgcgagaagtaccaaaaggtggaagatcagct
ggagtaaggattgctatcatcactcctgtagtcgcggctttcgttaccgttgtttctgga
attgtgatctggaagaagaagaactctggtgagaggaggaaggaggcagatgggaagttt
ttaaagaacagatttacactttctaattccttttgcttctgtttaagttga
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