Clarias gariepinus (North African catfish): 128509418
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Entry
128509418 CDS
T10780
Name
(RefSeq) BOLA class I histocompatibility antigen, alpha chain BL3-7-like
KO
K06751
MHC class I antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04145
Phagosome
cgar04218
Cellular senescence
cgar04514
Cell adhesion molecules
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128509418
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128509418
04145 Phagosome
128509418
09143 Cell growth and death
04218 Cellular senescence
128509418
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128509418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128509418
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128509418
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128509418
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Antigens
128509418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_2
C2-set_3
Ig_3
Ig_2
MHC_I_3
I-set
PepSY_TM
DUF4400
Motif
Other DBs
NCBI-GeneID:
128509418
NCBI-ProteinID:
XP_053337131
LinkDB
All DBs
Position
21:complement(5339815..5389901)
Genome browser
AA seq
355 aa
AA seq
DB search
MEDYSAVLNLLLLTTCVVHLSWTDTHSLQYLYTVNGQFIAVGLVDGEQFVYYDNNMKMIP
KTEWIKKIEADDPRYWDRETQHMTDQQDRFQVIVNQAKKRRLNPTEEVHTLQRMHGCELD
DNGTKRGYIQYAYDGEDYISLDLKTGTWTAANDKAERFINNWDPKGAEAEYWKDFLENDC
IDRLKKFMTYGNKTLERKVVPEVSLFQKHSPSPEVVCHATGFFPKALNITWQKDGEDVHE
DVELSETLPNQDGSFQRRSILKVSRMKLQKHTYTCVVQHSSLEKELVREVPKGRGTAGGT
GGPPIAIITAVVALIVLVALVAVVAGIVIWKKRKSGWRTTGTGDSPTPSLQSVTV
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaggactacagtgctgtactaaaccttctgcttttaaccacatgtgttgttcacctt
tcatggacagacacacactctctgcagtacctctacactgtcaatgggcaattcattgct
gttggtctggtggatggagagcagttcgtgtactatgacaacaacatgaagatgatccca
aagactgagtggataaagaagattgaagctgatgatccgcgttattgggacagagagaca
cagcacatgactgatcagcaagacaggtttcaggtcattgtgaatcaagcaaagaagaga
agactaaatcccactgaagaagttcacacactacagaggatgcacggctgtgagctggat
gataacggcaccaaaagaggatacatacaatacgcttatgatggagaagattacatcagt
ttggatctgaaaactggaacctggactgctgctaatgataaagctgagagatttatcaac
aactgggatcctaaaggcgctgaggctgaatactggaaagacttcctggagaatgactgt
attgatcgattaaagaagttcatgacttacggcaacaagactctggagaggaaagttgtt
cccgaggtgtcactgttccagaaacactctccttctccagaggtggtgtgtcacgctaca
ggtttcttccccaaagcactaaacatcacctggcagaaggacggagaggacgtgcatgag
gacgtggagctcagcgagacgttacccaaccaggatggaagcttccagaggagaagcatt
ctgaaagtctcaagaatgaagctgcaaaaacacacctacacctgcgtggttcagcacagc
agcttggagaaggagttagtgcgagaagtaccaaaaggtagaggaacagctggaggaaca
ggtggaccaccgattgctatcatcactgctgtagtggctctcatcgttcttgtcgctctc
gtcgccgttgttgctggaattgtgatctggaagaagaggaaatctggttggaggacgaca
ggaacaggagattctccaaccccaagcttacaaagtgtgaccgtgtga
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