Clarias gariepinus (North African catfish): 128509643
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Entry
128509643 CDS
T10780
Symbol
trpc3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128509643 (trpc3)
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128509643 (trpc3)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
128509643
NCBI-ProteinID:
XP_053337436
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Position
2:complement(12918124..12957854)
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AA seq
897 aa
AA seq
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MSAKSRLSKYSKRVSVPGDDENDEQGWKEENGGVDARHLKPVRSARDAPQSSRYSMKTLD
SFPARRMTLQREKGRRQAVRGPAFMFNARGSSLTAEEERFLDAAEYGNIPVVRKMLDESS
TLNVNCVDYMGQNGLQLAVGNEHLEVTELLLRRDNLARVGDALLLAISKGYIRIVEAILG
HPSFAGGERLTRSPRELQDDDFYSYDEDGTRFSPDITPIILAAHCHKYEVVHMLLIKGAR
IERPHDYFCKCADCTEKHRKDSFSLSRSRINAYRGLASPAYLSLSSEDPVLTALELSNEL
AKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVSVELEEGQHHRSLL
SRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQAIAIKCLVVLVVALGLPLLAVG
YWFAPCSKLGKVLRSPFMKFVAHAASFIIFLCLLVFNASDRFEGITTLPNVTVTDYPLQI
FRVKTTRFSWTEILIMVWVAGMMWSECKELWTEGPREYILQLWNVLDFGMLSIFIAAFTA
RFFAFLQAMKAQEYVDEKIHAADLSLVTLPPDIKYFTYARDKWLPSDPQLISEGLYAIAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILYSYYLGAK
VNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLYGIYNVTMVVVLLNML
IAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIVPSPKSFVHCISKLIRL
LRCRRRQLNKDVELGMENSKSRLNLFTQSNMHMSESHSFNSILNQPTRYQQIMKRLIKRY
VLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSILIQKLSEKMHTS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaaaagcaggctgtccaaatacagtaaaagggtgtcggtgcccggggacgat
gagaatgatgagcagggttggaaagaggagaacggcggtgtggatgcacgtcacctgaaa
cccgtgaggagcgcacgagacgcgccgcagtcctcgcgctacagcatgaaaactctggat
tcttttccagcccggaggatgaccttgcagcgtgagaagggtcgtcggcaggcagttcgt
ggaccagctttcatgttcaatgcacgtggaagcagcctgacagctgaggaggagcgtttc
cttgatgcagccgaatacgggaacatcccggtagtgcgtaagatgctggacgaatcatcc
acgctcaacgtgaactgtgtggattacatgggccaaaacgggctgcagttggccgtgggc
aacgagcacctggaggtgactgagctgctcttgcggcgagacaacctggcacgtgttggc
gatgccctcctgctggccatctcaaagggctacatacgcattgtggaagcaatactgggc
cacccatcatttgctggtggagaaaggctcacacgcagcccacgcgagctgcaggatgac
gacttttattcatacgacgaagacggcactcgcttctcacctgacatcacacccatcatc
ctagccgcccactgtcacaagtacgaagtggtgcacatgctgctgataaaaggtgcgcgc
atcgagcggccgcacgactacttctgcaagtgcgccgactgcacggagaaacacaggaag
gactcgttcagcctctccaggtccaggatcaatgcataccgtggtttggccagcccggca
tatctttcgctctccagtgaagaccctgtcctcaccgcgctggagcttagcaatgagctc
gccaaactggccaacatcgagaaggagtttaagaatgactacaggaaattgtctatgcag
tgtaaggactttgtggtgggggtgctggacctgtgcagggacacagaggaagtggaggcc
atcctgaatggagacgtatccgtggagctggaggagggccagcaccaccgctctctcctc
agcagagtcaaactggctataaaatatgaagtcaagaagtttgtggctcatcctaactgc
cagcagcagttgttgactatctggtatgagaacctgtcaggtctccgagagcaggccatt
gctataaagtgtttggtggtgctggtggtagctctgggcctccccctgctggctgtggga
tattggtttgctccatgcagcaagctgggtaaagtcctgcgcagtcccttcatgaagttt
gtggctcatgctgcgtccttcatcatcttcctttgcctgctggtctttaatgcgtctgac
cgctttgagggcattaccactctgcccaacgtcacggtcacagactacccgctgcagatc
ttcagagtgaagacgactcgcttctcatggactgagatcctcatcatggtttgggttgca
ggcatgatgtggtcagagtgtaaggagttgtggacagaagggccgagggaatacatcctg
cagctgtggaacgttttggattttggcatgctgtccatcttcattgcagcattcactgcc
cgcttcttcgccttccttcaggccatgaaagcacaggagtatgtggatgaaaagatccat
gctgccgacctctctctggtcacactaccacctgacatcaagtacttcacgtatgcgagg
gataaatggcttccctcagaccctcagctaatctcagaaggcctctacgccattgcagtt
gttctgagcttctctcgaattgcctacatcctcccagcaaacgaaagcttcggcccactg
cagatctctcttggacgcactgtaaaggacatcttcaagttcatggtgcttttcatcatg
gtcttccttgcgttcatgatcggcatgttcatcctttactcttactatcttggagctaag
gttaaccctgcctttacaacagtggaggagagttttaaaactttgttctggtctatattc
ggcttatctgaagtctcctctgtggttctaaagtacgaccataagttcatagagaacatt
ggttacgtcctgtatgggatatataatgtaactatggtggtggttctgctgaatatgctc
atcgctatgatcaacagctcctaccaggagatcgaggatgacgcagatgtggagtggaag
ttcgccaggtctaaactctggctgtcatatttcgataacggtaaaactttgccgcctccc
ttcagcatcgtgcctagccccaagtctttcgtccactgcatcagcaaactcattaggctg
ttgcgttgccggcggcgtcagcttaacaaagatgtggagctgggcatggagaactcaaag
tctcgacttaacctgttcacacagtccaacatgcacatgagtgagtcgcacagcttcaac
agcatcctcaaccagccaacacgctaccagcaaattatgaaacggctaataaagcgttac
gtcctgaaggcacaagtggacaaagagaatgacgaagtcaatgaaggtgagttgaaagag
atcaagcaggacatctctagtctgcgttacgagctgttggaagacaaatcccaggccaca
gaggagctctctattctcattcaaaaactcagtgaaaaaatgcacacatcgtaa
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