Clarias gariepinus (North African catfish): 128509736
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Entry
128509736 CDS
T10780
Name
(RefSeq) BOLA class I histocompatibility antigen, alpha chain BL3-7-like
KO
K06751
MHC class I antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04145
Phagosome
cgar04218
Cellular senescence
cgar04514
Cell adhesion molecules
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128509736
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128509736
04145 Phagosome
128509736
09143 Cell growth and death
04218 Cellular senescence
128509736
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128509736
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128509736
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128509736
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128509736
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Antigens
128509736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
Ig_3
C2-set_2
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
128509736
NCBI-ProteinID:
XP_053337545
LinkDB
All DBs
Position
21:complement(4444792..4462107)
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AA seq
296 aa
AA seq
DB search
MENILLITCFLYVSADTHTLQYLYTAVTPGLTDFPEFTAVGLLDGEQFMFYSSNNRSLII
KDSIKKTNSETYWRRETEDMRGNQDIFTNTFTTAMKEFHHRTGVHTLQRMFGCERDDDDD
VTTRGYDQYGYDGEDFISLNLTTGTWTAVKPQAVTIKHTWESKGSNKYWKNFLEGDCIDL
LKKYTSYSRDTLNRKVRPEVSVFQKHSPSPEVVCHATGFFPKPLNITWQKDGEDVHEDVE
LRETLPNQDGSFQKRSILKVSSTKLQKYTYTCVVQHSSLEKELVREVPKGPNKLEL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatattgttaattacgtgttttctttatgtttctgcagacacacacactctg
cagtacctctacactgcagtcacacctggacttactgatttcccagagttcactgctgtg
ggtctgctggacggagagcagtttatgttctacagcagcaacaacaggagtctgatcata
aaggactcgataaagaagactaacagtgagacctactggaggagagagacagaggacatg
cggggcaatcaggacatctttaccaacacgttcacaacggcaatgaaagagtttcatcac
aggacaggagttcatacactacagaggatgtttggctgtgagcgtgatgatgacgatgat
gtcaccactagaggatacgatcagtacggttatgatggagaagatttcatcagtctgaat
ctgacaactggaacctggactgcagttaaacctcaagctgtgacaatcaaacacacctgg
gagtctaaaggttctaataaatactggaagaacttcctggagggtgactgtatcgatctg
ttaaagaagtacacgtcttacagcagagacactctgaacagaaaagttcgtcccgaggtg
tcagtgttccagaaacactctccttctccagaggtggtgtgtcacgctacaggtttcttc
cccaaaccactaaacattacctggcagaaggacggagaggacgtgcatgaggacgtggag
ctcagagagacgttacccaaccaggatggaagcttccagaagagaagcattctaaaagtc
tcaagcacaaagctgcagaaatacacttacacctgcgtggttcagcacagcagcttggag
aaggagttagtgcgagaagtaccaaaaggtcctaataaactagagctgtag
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