Clarias gariepinus (North African catfish): 128509986
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Entry
128509986 CDS
T10780
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128509986 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128509986 (nup210)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128509986 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_13th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_5th
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_9th
Ig_NUP210_14th
Ig_NUP210_6th
Ig_NUP210_1st
Ig_NUP210_16th
Big_2
NUP210_Ig
Motif
Other DBs
NCBI-GeneID:
128509986
NCBI-ProteinID:
XP_053337877
LinkDB
All DBs
Position
22:complement(833531..865825)
Genome browser
AA seq
1834 aa
AA seq
DB search
MAELGFRSVVLLLLLTSCWSSGHAAKLNVPKVLLPLARSTKINFTLETTEGCYRWSSNRP
EVARVEALDIDERQCSHRALLQASSTQHSRLTSIIQAEDVVTGHVLRCDAIVDVISEIQI
VSTTRELHLEDSPLALTIHALDSEGNTFSTLAGLLFDWSLVKGTETVVFPDSHSSLRVLK
FSESTYKPPTYISEMERVGKQGDIILVSGIKTGHAKLKAKLLEPLYTHVGAAEVRLLILD
NVMLNPAYDVYLLAGSSIKYRVQKIRQGKITELSMPCDQYELQVKNSVVAPGGDLLSPVA
ELEPSTSKVYALQHGQTKVVLDYKTVDMKGASRLPNGTLYVVEPGYLMFKIKPGEHWVLE
TGRTYEISIEVFDKSSNKIYLSDNIRIEPTFPEEFFQVLESSLNGSYHRVRALKNGQTVI
KGLLRAVVDRRGTEHLLPVPVRNEQEVEIYDPIVLNPSILTFPWQPKEGAYQYTIKASGG
SGNFSWFSSNTAVAMVTVKGVMTTVRDIGVSTIYAYDLRNPVHYGEMKVYVIEPVRMEFT
PCVVEARVNLALELPLRIFGQLSSEDGERVTLSDCSHFDLQVQMENQGVFQVQPGRLPPG
QQHCSGVRVQAMSPGYTNLLVSYTHGNVHLSARITIAAYPPLRAVDPVSVALVTLGSSKD
MLFEGGPKPWILEPSKFFRNLTAEDPSSVTLLLTGPASRNYFTHNVRATCRALGEQVLAV
TVGNRPTLTNPFPAVEPVVVKFVCAPPSRLALVPIYTNAQLDLSCPLLQHNKQMVPVSNY
RNPELDVAAFDQQGRKFDNFSSLSVTWETSRAALASLESSQPMELYTAEETNSKQKKLHG
RRTVVVHHESGVASITVSALGYQTSHLEKAAVLPGFEPLTVVSSTLELLLVEDVTVTPQS
VFMYNHPDVRAELTLREGSGYFFVNTSVHGIANVEFQESRGTAVVIPVHAGVLQVMVYDL
CLTFPAPATATVHVLDILEVYVHVVDKVEIGKSVRAYVRVLDDNKKPFLAKYLSHMNLKL
KAASSIISLQPLSEYSEKDMATFLVKGLMIGQTSISAVVTDKSGRTITSAPQQFEVFPPF
RLLPRKVTLIIGAMMQITSEGGPQPQSNILFSLSDPSIASINGAGQVRGVAVGNMTVTGV
VQAADTESGKLVVISQDQVEVEVVQLKGVRIRAPITRMKTGTLIPVYVMGLTSSETPFSF
GNALPGLTFHWSVTKRDILDVHTRHSEATIKLSAEHNFAMSVSGLSKGRTGLKVVVRATV
PDAGHLWGNRLELSDEIQIQVYEKLQLLNPEVQAEEILMSPNSFLKLQTNRDGVGSLSYR
VLDCPDKAPLIQVDDNGLLTSGALTGTASLRITALENFGVNQTIIIAVKVVTVSYLRLST
SPVFYTSNRETLSAIPLGSDLTFTVHFHDSTGEALHSHNSQFTFSTNRDDLVQVGNGASN
SSLTVRTVNVGLTLLSVWDSEQSGLVDFVALPVHHAIQMGDAHHLVPADVVCFSAQLISH
DGLSGTWNSSSSSILEIHPKTGVAVARDVGTVTVYYEMPGQLRTYREVVVNSVSKTVATV
PSGSARKDSVTRVLLTTRERGTNLIGSCSQAQLESVSSLHPETSISCRPRFTSDTIDFSA
QDVYHTHTTFDTSTGVYSCVLTLRPMTEQQVKVLGVSMSRVRVEADVVGSHFSGERVGVE
LQVNAGVYTDQSHLILSSQHTSTELTVYGAAGLLQHLQMKSSSPSILVQEKEASYTYPSF
KRYTVTLLNSRDVTSSSLTILSPGNEQQLLIPITVVPVADSTFTSRAAVGDKEGVGILQQ
FMDSYQVMFFTLFALLAGTAVTVIVCHALFFPRN
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcagaactcggcttccggtctgtagtcctgctgctgctcctgacttcctgttggtct
tctggtcatgctgctaaactcaatgtccccaaagtcctgctccctctggccaggagcacc
aagatcaacttcaccctggagaccactgaaggatgctacagatggtcatcaaacagaccc
gaggtggcgagagtcgaagccctagacatagacgagcgtcagtgttctcacagagcctta
cttcaggctagctccactcagcactcgcgcctcaccagtattattcaagccgaggacgtc
gtgacggggcacgtgttacgctgcgacgccatcgtggacgtcatcagcgagatccagatc
gtctccaccacacgagagctgcacctggaggactcgccccttgcactgactatacatgcg
ctggattcagaaggaaacacgttcagtacgctggcaggtctgttgtttgactggagcctc
gtgaagggcacggaaacggtcgtgttccccgattcacacagctccttacgggtcctgaag
ttctcagagtcgacctacaagccgccaacctacatctcagagatggagagagtgggaaag
caaggagatatcatcctggtgtctgggattaaaactggccatgcaaaacttaaagctaaa
ctcctggagcctctgtacacgcatgttggagctgctgaggtgcgactgctgattctggac
aacgtcatgctgaatcctgcctacgacgtctacctgctcgccggatcctccatcaagtac
agggtgcagaaaatccgccaagggaagatcacagagctctccatgccgtgtgatcagtac
gagctccaagtgaagaacagtgttgttgctcctggaggagatttgttgtctccagtggcc
gagctcgaacccagcacctccaaggtctatgcccttcagcacggacaaaccaaggtcgtc
ctggattacaagactgtggacatgaagggcgcgtcccggcttcctaacggcacgttgtac
gtggtggaacccggatacctcatgtttaagataaagcccggagaacattgggttctggag
actggaagaacctacgagatatccatcgaagtgttcgacaaatccagcaacaagatttat
ctctctgataacatccggatagaacccaccttccctgaagagttctttcaggttctggag
tcgtctctaaatggatcgtaccaccgtgtgagagcgctgaagaacggacagacggtcatc
aaggggttgctgagggcagtggttgatcggagaggaacggaacatttacttcctgttcca
gtcaggaacgaacaggaagtcgaaatctacgaccccattgtcctcaatccctccatcctc
acgtttccatggcaaccgaaagaaggagcgtatcagtacactatcaaggcgagcggagga
agcggtaacttcagttggttttcctcgaacacggccgtcgctatggtgacggtgaagggc
gtgatgacgacggtgcgcgacatcggagtgagtacgatctacgcgtatgacctgaggaac
ccagtgcattacggagagatgaaggtgtatgtgatcgagcccgtgaggatggagtttacg
ccgtgtgtggtggaggctcgggtgaatctcgctctggagcttccgctgcgtatctttggg
cagctgagctctgaggacggagagagggtcacgctaagcgactgctcacactttgatttg
caggtccagatggaaaatcagggtgtgtttcaggtgcaaccagggcgtttgccccccggt
cagcagcactgcagcggtgtgcgtgtccaggccatgtctccaggttacaccaacctgctg
gtcagttacacacacggaaacgttcacctgagcgccaggatcaccatcgcagcttaccca
cctctcagagctgtggatccggtctcggttgctctcgttactctcggctcctctaaagac
atgctgttcgagggcggtccaaagccgtggatcctcgaaccttccaagttcttcaggaac
ctgacagcagaggatccgagcagcgtcacactattgctaacaggcccggcgtcgcgcaac
tacttcacccacaacgtcagagcgacgtgccgcgccctcggggaacaggtgttggcggtg
acggtggggaatcgtccgacgctcactaaccccttcccagcggtggagccggtggtggtg
aagtttgtgtgcgctcctccatcacgcctggcgctcgtccccatctacaccaacgctcag
ctcgacctgtcctgccctctgctgcagcacaacaaacaaatggtccctgtgtctaattat
cggaaccctgagctggacgtggcggcgtttgaccagcagggcaggaagtttgataacttc
agctctctgagtgtgacgtgggaaacgtccagggcggcgctcgccagcctcgagtccagc
cagcccatggagctgtacacggccgaggagaccaacagcaagcagaagaaactccacggt
cgtcggacggtggttgtccatcacgagtcgggcgtggcatccatcactgtaagtgcactg
ggctaccagacatctcacctggagaaagctgctgttttgcctgggtttgagcctctgacg
gtggtctcttctacactggagctcctgttggttgaggatgtgactgtgactccacagtct
gtctttatgtataatcaccctgatgtgcgggctgagctcactctgcgagaaggctcgggt
tatttctttgtcaatacgagtgttcatggaatcgctaacgtggagttccaggagtctcgg
ggaactgctgtggtgattccagtgcatgccggggtcctccaggtgatggtttacgacctc
tgtttgacctttcctgctcctgctacagccacggtgcacgtgttggacattctggaggtt
tacgttcatgttgtggataaggtggagattgggaagtctgtgagagcatacgttcgagtt
ttggatgacaacaaaaagccatttcttgctaaatatttgtctcatatgaatctaaaactg
aaagctgcttcatccatcatctctctgcaacctttatctgagtattctgagaaggacatg
gccacgttcctggtcaaaggcttgatgatcggtcagacgagtatctctgctgtcgtcact
gataagagcgggagaacgatcacatctgcgccgcaacaatttgaggttttcccgcctttc
aggctgcttccgagaaaagtcacgctgattatcggggcgatgatgcagatcacatcagaa
ggaggtccacagcctcaatccaacattctgttctccttaagcgacccaagcatcgcctcc
attaacggcgccggtcaggtgcggggcgtcgccgtgggcaacatgactgttacaggagtc
gtacaagctgccgatacggaaagtggcaaactggtggtgatctcgcaggatcaggtggag
gtggaggtggtgcagctcaaaggcgtccgaatcagagcgcccatcactaggatgaagacc
ggtaccctgatacccgtgtacgtgatgggtctaacaagcagcgagactccattctctttt
gggaacgctctcccaggactcacgtttcactggagtgtaactaaaagagacatcctggac
gtccacacacgccattcagaggccactattaaactttctgccgagcacaacttcgccatg
agtgtgtctggtctcagtaaaggacgcactggactgaaggtggtggtgcgagcgactgtc
ccggatgctgggcatctgtggggcaacaggctggagctgagtgacgagattcagatccag
gtttatgagaaattgcagctgttgaatccagaagtgcaggctgaggagattttaatgtcc
ccgaactccttcttaaaactccaaaccaaccgggatggagtgggctctctttcgtatcgg
gttctagactgtcccgataaagctcctctcatccaggttgacgataacggcctcttgacg
tcaggcgctctgacaggcacggcgtcattacggatcaccgctctggagaacttcggagtc
aaccagaccataattatcgctgtcaaggtggtgaccgtgtcgtacctgagactgagcacc
agtccggttttctacacctccaacagagagacgctgtcggccatcccgctcggctccgac
ctcaccttcaccgtccacttccacgacagcactggtgaagctctgcacagccacaactcc
cagttcaccttctccaccaacagggacgacctggtgcaggtgggtaatggtgcgagtaac
agctctctcacagtgaggacagtaaacgttggtttgacgctgttgagtgtttgggattcg
gagcaaagcggcctggtggatttcgtcgccctgcccgtccatcacgccatccagatgggc
gacgcccaccacctggtgcctgctgatgttgtgtgtttctcagcgcagctcatcagccac
gatgggctctcaggaacgtggaactcctcctccagctccatcctggagatacatcccaaa
actggcgtggccgtggctagagacgtgggcactgtgaccgtttattatgagatgccagga
cagctgcgcacttatagagaggtcgttgtgaacagtgtctccaagacagttgccacggtt
ccctcaggttctgcgagaaaagacagcgtgaccagagtgctcctgaccaccagagagcga
ggaaccaacctcatcggaagctgctcgcaggctcagttggaaagcgtgtcctctctgcat
ccagagacatccatcagctgccgtcctcgcttcaccagtgacaccatcgacttctccgct
caagacgtctatcacacacacaccaccttcgacacaagtacaggtgtgtacagctgtgtg
ttgaccctccggccgatgactgagcagcaggtaaaggttttgggcgtgtccatgagcaga
gtgcgggtggaggcggatgtggtggggagtcacttctcaggagagcgagtcggtgttgag
ctgcaggtgaatgccggagtctacaccgaccagtcgcacctcatcctgagcagccagcac
actagcaccgaactgaccgtgtacggggccgcgggactgctacagcacctgcagatgaag
tcgagctctccctccatcctggtccaggagaaggaggcttcctacacctaccccagcttc
aaaagatacaccgtgaccctgctgaactcgcgggacgtcacgtcttcctctctaaccatc
ttgagtcccggaaacgagcagcagctgctcatccccatcaccgtcgtacctgttgcagac
tccaccttcaccagcagagcggctgtgggtgataaagagggagtcggaatcctgcagcag
tttatggactcataccaggtcatgttcttcacgctgtttgcgctcctggccggtacggcc
gtcaccgtcatcgtgtgccacgctcttttctttcccagaaattaa
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