Clarias gariepinus (North African catfish): 128510233
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Entry
128510233 CDS
T10780
Symbol
vdra
Name
(RefSeq) vitamin D3 receptor A isoform X1
KO
K08539
vitamin D3 receptor
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128510233 (vdra)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128510233 (vdra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgar03310
]
128510233 (vdra)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128510233 (vdra)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128510233 (vdra)
Nuclear receptors [BR:
cgar03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
128510233 (vdra)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
Motif
Other DBs
NCBI-GeneID:
128510233
NCBI-ProteinID:
XP_053338340
LinkDB
All DBs
Position
22
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AA seq
430 aa
AA seq
DB search
MVRRSSRISPVMEAMAVSISAQSTDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFR
RSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKELILK
RKEEEAMREAQKPRLTEEQTQIINMLVEAHHKTYDDSYSDFVKFRPPVREGPVTRSASRA
ASLHSLSSDASSDSLNNSPESMDRKLSSLFSMCQDGVMSPDSRDENSRLSMLPHLADLVS
YSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLDDMSWSCGGPDFKY
CVNDVTKAGHTLELLEPLVKFQVGMKKLNMQEEEHVLLMAICLLSPDRPGVQDHVRIEAM
QERLCDTLQAYIRVHHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPL
VLEVFGSEVS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggttcgaaggtcaagtcggatctcccctgtaatggaggccatggccgtcagcatatct
gcacagagtacggatgagtttgaccgcaatgccccgcggatctgcggcgtctgcggagac
aaggccaccggattccacttcaacgccatgacctgcgaaggctgcaagggctttttcagg
cgcagtatgaagcggaaggccagtttcacttgtccctttaacggcagctgtaccatcacc
aaagataaccgcagacattgccaagcctgtcgcctcaagcgctgcgtcgacattggcatg
atgaaggagttcattctgactgatgaggaggtgcagaggaagaaggagctgatcctgaag
agaaaggaggaggaggcgatgcgggaggcgcagaagccgcggctgaccgaggagcagact
cagatcatcaacatgctggtggaggcgcatcacaagacctacgacgactcctattccgac
tttgtgaaattccggcctccagtgagagagggtccagtgacacgcagtgccagtcgtgct
gcctcgctccactcgctctcttcagatgcctcttcagattcattgaacaactcaccagag
tccatggacagaaagctcagcagtctcttctccatgtgtcaggatggagtgatgagcccg
gactccagggatgaaaactcccgcctctccatgctgccccacctggccgacctcgtcagc
tacagcatccagaaagtcatcggattcgccaagatgatccccggcttcagggatctgact
gcagaagatcagatcgccctgctgaagtccagcgctatcgagatcatcatgttgcgctcc
aaccagtccttcagtctggacgacatgagctggagctgcggaggaccggactttaaatac
tgcgtcaacgacgtgactaaggctggtcacactctggagctgctggagccgctagtgaag
tttcaggttgggatgaaaaaactcaacatgcaggaagaggaacacgtgctgctaatggcc
atctgtctcctctctccagatcgtcccggcgtgcaggatcacgttcggatcgaggcgatg
caggagcgtctgtgcgatacactgcaggcgtacatccgcgtgcaccacccgggcggccgg
ctgctctacgccaagatgatccagaagctggccgacctgcgcagcctgaacgaggaacac
tccaagcagtaccgctcactgtccttccagccggagcacagcatgcagctcacaccgcta
gtgctcgaggtgttcggcagcgaggtgtcctag
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