Clarias gariepinus (North African catfish): 128510665
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Entry
128510665 CDS
T10780
Symbol
plod3
Name
(RefSeq) multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
KO
K13646
lysyl hydroxylase/galactosyltransferase/glucosyltransferase [EC:
1.14.11.4
2.4.1.50
2.4.1.66
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar00514
Other types of O-glycan biosynthesis
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128510665 (plod3)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
128510665 (plod3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128510665 (plod3)
Enzymes [BR:
cgar01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.4 procollagen-lysine 5-dioxygenase
128510665 (plod3)
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
128510665 (plod3)
2.4.1.66 procollagen glucosyltransferase
128510665 (plod3)
Glycosyltransferases [BR:
cgar01003
]
O-Glycan biosynthesis
O-linked Gal type
128510665 (plod3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GT_PLOD
2OG-FeII_Oxy
OGFOD2-like
Anp1
2OG-FeII_Oxy_3
HK_sensor_dom_bact
Motif
Other DBs
NCBI-GeneID:
128510665
NCBI-ProteinID:
XP_053339086
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Position
22:complement(29355807..29369048)
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AA seq
730 aa
AA seq
DB search
MEVRFLPVIFYLLMESVTEGVKPTADDLLVVTAATDETDGFKRFMRTAQEFNYTVKVLGL
GEEWKGGDVAKTVGGGQKVRWLKMEMEKYKDNQDRIILFVDSYDVILASGPDELLKKFSR
FNHRVVFSAEGFCWPDQRLAPKYPAVHTGKRYLNSGGFIGYAPELYAIVQQWNHKDNDDD
QLFYTRIYLDKEQRTKLNMTLDHKARIFQNLNGAVEEVVLKFEKARVRARNVAYDTLPVV
IHGNGPTKLQLNYLGNYVPTAWTYERGCGVCDDDLLYLNDVPDDEMPRVLIAVFIEQATP
FIQELLQRLTTINYPHTRLRLFIHNNVVYHEQHVQQFWNQYRSLFPSALIVGPEENLRHD
QARTMAVEMCKSDPACDYYFSMDSDMALINPDTLRILIEENKAVIAPMLTRPGKLWSNFW
GALSPEGFYSRSEDYIDIVQAKRVGVWNVPYITQVYLIRGDVLRTRLSQVSLYQEDGLDP
DMVFCRAVRDQGVFMFVSNRDEFGRLIATNNYNISRLHPDMWQIFDNPMDWKEKYIHEDY
FKIFEDGEGLVEQPCPDVYWFPAFSDKMCDDLVETMEHFGQWSGGNHQDTRLTGGYENVP
TVDIHMNQIQFEKEWLKFLKDYIVPVNEKFFPGYYAKGKAIMNFVVRYRPDEQPSLRPHH
DSSTFTINIALNSKGKDFEGGGSRFLRYDCRVESPRKGWSLMHPGRLTHYHEGLPTTKGT
RYIMVSFVDP
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaggtccggttcctcccggtgatcttctatctcctgatggagtcagtaaccgaggga
gtgaaaccgacagcagatgatctgttggtagtcactgctgcgactgatgaaacagacgga
tttaagaggtttatgagaactgcacaagaattcaactacactgtaaaggtgctgggtttg
ggtgaagagtggaaaggaggtgatgttgctaaaactgttggaggaggtcagaaggttcgc
tggctgaagatggaaatggagaaatataaagataatcaggacaggattattctctttgtg
gacagttatgacgtcatcctggcgagcggtcctgacgagctgctgaagaagttctctcgc
tttaaccaccgcgtggttttctctgctgagggattctgctggccggatcagcgcctggcg
cccaaataccctgcggtccacaccggcaagcgctacctcaactccggaggttttattggc
tatgcaccagagctctatgctatagttcaacagtggaaccacaaagataacgatgacgac
cagctgttctacacgcgcatctacctggacaaggagcagaggacgaagttaaacatgacg
ttggatcacaaggcacgaattttccagaatcttaatggggctgttgaggaagttgttttg
aagtttgagaaagctcgagtaagagctcgaaatgttgcttatgacacacttcctgttgtt
atccacggcaacggcccgactaagctccagttgaactatctggggaactacgtgccgacg
gcgtggacatacgagcgcgggtgcggtgtgtgtgatgacgatctgctgtatttaaacgac
gtgccggatgacgagatgccgcgggtcctcatcgccgtgtttatcgagcaggccacgccc
ttcatccaggagctcctgcagcgtctcaccaccatcaactacccacacacacgcctgaga
ctgttcatacacaacaacgtggtgtatcatgagcagcatgtgcagcagttctggaatcag
tatcgctctctgttccccagcgctcttattgttggacctgaagagaacctacggcacgac
caggccagaaccatggcagtggagatgtgtaagagtgatcctgcctgtgattactacttc
agtatggacagcgatatggctttgatcaacccagacacactgcgcatcctgatcgaggag
aacaaggcggtgatcgcccccatgctgacccgacccggtaaactctggtctaatttttgg
ggagctctgagtcctgaagggttttactctcgctctgaggattacatcgacatcgtccag
gcgaaaagagttggggtgtggaacgttccctacatcactcaggtgtatctgattcgaggt
gacgtccttcgtactcgtctctctcaggtgtctctctatcaggaggacgggttggaccca
gacatggtgttctgcagggcagttcgggaccagggtgtgttcatgtttgtgagcaatagg
gatgagttcggccgactgatcgccaccaacaactataacatcagcagactgcatccagac
atgtggcagatctttgacaaccccatggactggaaggagaagtatatccatgaggattac
tttaagatctttgaggatggtgaaggtctggtggagcagccatgcccagatgtttactgg
tttcctgcgttttcagacaagatgtgtgacgacctggttgagaccatggagcactttggc
cagtggtcaggggggaatcatcaggacaccaggttaacaggtggttatgaaaacgttccc
acagtcgatattcacatgaaccagattcagtttgagaaagagtggctcaagttcctgaaa
gattacatcgttcctgtaaatgagaaatttttcccagggtattatgcaaagggtaaagct
ataatgaactttgtggttcgttatcgtcctgatgaacagccttcactccgcccacatcac
gactcttcaaccttcacaatcaacatcgctctaaacagcaaagggaaagacttcgaagga
ggcggctccaggttcctccgttatgactgcagagtagagtctcccagaaagggctggtct
ttaatgcacccgggacgtttaacacactaccatgagggtctgcccacaaccaaaggcact
cgatacatcatggtctcctttgtagacccctaa
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