Clarias gariepinus (North African catfish): 128510890
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Entry
128510890 CDS
T10780
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128510890 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128510890 (ap4b1)
Membrane trafficking [BR:
cgar04131
]
Endosome - Golgi transport
Others
AP-4 complex
128510890 (ap4b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
HEAT_MROH2B_C
EntA_Immun
HEAT_IPO9_c
Hda_lid
Motif
Other DBs
NCBI-GeneID:
128510890
NCBI-ProteinID:
XP_053339420
LinkDB
All DBs
Position
22:complement(4288511..4302024)
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AA seq
744 aa
AA seq
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MPYFGCEETVKDLKRALSNPNVQADRLRYRNYITRVIRCMTEGVDVSSVFMEMVKASATV
DVVQKKLVFLYMVTFAAVKPDMALLAINTLRKDCDNPNPMIRGLALRNMCNLRMPGIIEY
IHQPVLNALRDKSSYVRRVAVLGCAKIHSLQPEAEIDGAMVNELYSLLRDPDPVVMVNCL
RALEEILHQEGGVVINKPIAHHLINRLKDLDSWSQSEVLTFLLRYRPRNDDELFDILSLI
DTFLLSAQPPVMAATLRLFLHLAAAQPTVQADALTRARGPLLAACGAAAREMRFTALCHV
QQVLRSQPTAYGSHYKRFFCAFSEPTYIKLRKMEILEELVNDENVALILEEMKSYCTDVS
TELAQAAIKAIGRIGRTYTEKCLEILTGLLALKQEHITSAVLQTYRDLAWFCPQSTAAVC
RAVEGCDDLPQDDEGKQALLWLLGVHGDQISSAPYVLEGFIDGLRMEISSAVKTELLTAS
LKLFLSRPAETQDMLGRLLHYCIEEDSDMCVRDRALLYYRLLQCGVNETRKVLLGPKSDM
SMTIITGRTEEPVNHWASSFNTLDPLLGAESRAQDVPAEISNGDGEIKIDDTDPAFQNGT
LREERDTDGIPDASAEPALSLSPLVSHDVFEKLWMELQVLHRQCLGVPRPSVSPDTLNSA
FQLVKIQILAYSRSDARPWKLYMYSWSGGSVILAELLQDAADEPHRHGNLKLSIKQHPEE
REAVEGFVSVVLNVLRTLSSADTS
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatttcgggtgcgaggagacggtgaaggacctgaagagggcgctgtccaatcca
aatgtccaagcagaccggctccgctacagaaattacatcacacgggtcatcaggtgtatg
acggagggtgtggacgtgtcgagtgtgttcatggagatggtgaaggcgagcgcgacggtg
gacgtggtgcagaagaagctggtgtttctctacatggtgacgttcgccgcggtgaaaccc
gacatggctctgctcgcgataaacacgctgaggaaggactgcgacaacccgaaccccatg
atccgcggcctggcgctccgcaacatgtgcaacctcaggatgcccggaataatcgagtac
atccatcagccggtcctgaacgcactgcgggacaaatcgtcctacgtgaggagagtagcc
gtgttaggatgcgccaaaatacacagcctccaacctgaagctgagatcgatggcgctatg
gtgaacgagctgtactctctgttgagagaccccgaccctgtagtgatggtaaactgcctg
cgtgctctggaggagatcttacaccaggaaggaggcgtcgtcatcaacaagcccatcgct
caccacctcatcaacaggctgaaggatttggacagctggtctcagagcgaagttctcacg
ttcctcctgcgttaccgtccccgaaacgacgacgagctcttcgacatcctcagcctgatc
gacaccttcctgctcagcgctcagccgcccgtcatggccgccacactccgccttttcctg
catttagctgccgctcagccaacggtgcaggctgacgcccttacgcgtgcccggggcccc
ctgctggcagcctgcggagctgcagcccgcgaaatgcgcttcacagcgctctgccacgtg
cagcaggtcctccggagtcaaccaaccgcatacggcagccattacaaacgcttcttctgc
gctttctctgaaccgacgtacatcaaactccgcaaaatggagatcctggaggagctggtg
aacgacgagaatgtagcactgatcttagaggaaatgaagagttactgtactgacgtctcc
accgaactggcccaggctgccattaaagcgataggccggatcggacgaacgtacactgag
aagtgtctggagattctcacaggattgttggcactgaagcaggaacacatcacttctgct
gtgttacagacgtacagagacctggcatggttttgcccccaaagcaccgcggccgtgtgt
cgtgccgtcgaggggtgtgacgatctccctcaggacgacgagggaaaacaggctttgtta
tggctgcttggggtgcatggagatcagatcagtagcgccccctatgtgctggagggcttc
atagacggactaaggatggagatctcctctgcagtgaagacagaacttctcacagcatcg
ctgaaattatttctgtcccgtcctgcagagactcaggacatgctggggcgtctcttacac
tactgtattgaggaggacagtgatatgtgtgtgagagatcgagctctgttgtactacaga
ctcctgcagtgtggagtaaacgaaacccgcaaggttctcctgggtccaaaatcagacatg
tccatgaccatcattaccgggcggaccgaggaacctgtcaatcactgggcttccagtttc
aacacgctggatcctcttttaggagccgagagccgcgctcaggacgttcctgcagagatc
tctaatggagatggagaaatcaaaatagatgatacggatccagcctttcagaatggaaca
ctgagggaagaaagagacactgacggcattcctgatgcctcagcagaaccagcgctgtct
ctgagtcctctggtatcccatgacgtttttgaaaagctgtggatggagctgcaggtgctg
caccgtcagtgtctgggcgtccctcgtccctccgtctctcccgacactctaaactccgcc
ttccagctggtgaagatccagatcttggcgtacagccggagcgacgcccgtccctggaag
ctctacatgtacagctggagtggtggcagcgtgatcctcgccgagctcctgcaggacgct
gcagacgagccccatcgccacggcaacctcaaactgtctatcaaacagcatcccgaggag
cgagaagccgtcgaaggcttcgtgtctgtggtcttaaacgtcctacgcacactgagctca
gccgacacatcatga
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