KEGG   Clarias gariepinus (North African catfish): 128512828
Entry
128512828         CDS       T10780                                 
Name
(RefSeq) tropomyosin alpha-4 chain-like isoform X1
  KO
K09290  tropomyosin 3
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04260  Cardiac muscle contraction
cgar04261  Adrenergic signaling in cardiomyocytes
cgar04814  Motor proteins
cgar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    128512828
   04820 Cytoskeleton in muscle cells
    128512828
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    128512828
   04261 Adrenergic signaling in cardiomyocytes
    128512828
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgar04812]
    128512828
Cytoskeleton proteins [BR:cgar04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     128512828
SSDB
Motif
Pfam: Tropomyosin Laminin_II CALCOCO1 TMF_DNA_bd Crescentin DUF3450 PUMA_CC TMP_N XhlA DUF16 CENP-F_leu_zip Lebercilin HR1 DUF1664 KH_DEAH11_2nd WS_DGAT_cat DUF745 ERM_helical EzrA CLZ Nuf2_DHR10-like HCR
Other DBs
NCBI-GeneID: 128512828
NCBI-ProteinID: XP_053342230
LinkDB
Position
25:complement(5332773..5349962)
AA seq 248 aa
MAGVNSVEAVKRKIKVLQQQADEAEERAEVLQRQVEEEKRAREQAEADVASLNRRIQLVE
EELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEVQLKEAKHIAE
EADRKYEEVARKLVIIEGELERTEERAEVAEAKCAELEEELRNVTNTLKSLEAQTEKYSQ
KEDKYEEEIKILTDKLKEAETRAEFGERSVTKLEKTIDDLEERLATAKEENIKIHATLDA
TLLDLNTF
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccggagtgaacagcgtggaagcggtgaagcgtaagattaaagttctgcagcaacag
gcggatgaagccgaagagagagccgaggtcctgcagagacaggtcgaggaggagaaacgc
gccagggagcaggctgaggcggacgtcgcttctctgaacaggcgcatccagctggtcgaa
gaggagctggatcgagctcaagagagactcgccaccgctttgcaaaaactggaggaggca
gagaaggctgcagacgagagcgagaggggcatgaaggtgattgagaacagggctctaaag
gatgaggaaaagatggagctgcaggaggtccagctgaaggaggccaagcatattgctgag
gaagctgaccgcaaatacgaggaggtggctcgtaagcttgtcatcattgagggtgaattg
gagcgcacagaggagcgagcagaagttgctgaggccaaatgtgcggaattggaggaggag
ctgagaaatgtcaccaataccttaaagtccttggaggcccaaactgagaagtattcccag
aaggaggacaagtacgaggaagagatcaagattctcacggataagctgaaggaggctgag
actcgcgccgagttcggtgaaagatcagtcaccaagcttgagaagaccatcgacgatttg
gaagagaggctcgccaccgctaaagaggagaacatcaagatccacgccacgctggacgct
actctgctggatctcaacaccttctaa

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