Clarias gariepinus (North African catfish): 128512879
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Entry
128512879 CDS
T10780
Symbol
tgfb1a
Name
(RefSeq) transforming growth factor, beta 1a
KO
K13375
transforming growth factor beta-1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar04068
FoxO signaling pathway
cgar04110
Cell cycle
cgar04148
Efferocytosis
cgar04218
Cellular senescence
cgar04350
TGF-beta signaling pathway
cgar04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128512879 (tgfb1a)
04350 TGF-beta signaling pathway
128512879 (tgfb1a)
04068 FoxO signaling pathway
128512879 (tgfb1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128512879 (tgfb1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128512879 (tgfb1a)
09143 Cell growth and death
04110 Cell cycle
128512879 (tgfb1a)
04218 Cellular senescence
128512879 (tgfb1a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128512879 (tgfb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cgar03110
]
128512879 (tgfb1a)
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128512879 (tgfb1a)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128512879 (tgfb1a)
Chaperones and folding catalysts [BR:
cgar03110
]
Intramolecular chaperones
Others
128512879 (tgfb1a)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Transforming growth factors (RSTK binding)
128512879 (tgfb1a)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Growth factors/receptors
128512879 (tgfb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
PhrC_PhrF
Motif
Other DBs
NCBI-GeneID:
128512879
NCBI-ProteinID:
XP_053342339
LinkDB
All DBs
Position
25:complement(8362652..8385688)
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AA seq
379 aa
AA seq
DB search
MRQLCLALAVVCMATVIGAMSTCKTLDLEVAKRKRIEAIRGQILSKLRMAKEPEPEEDTK
EESIPENIISLYNSTVETTRDQQNEQAPASYQQEEEEYFGKEMHKFEMTKGESNGTGKKQ
LYFNISEIKQSIPDYRLLSQAMLRLRVKETSIQNGSPQRLEIYKGVGNAAKYLDFHEITN
DLNNKWISFNVTATIKEWLQLPENEQAFELRLYCACGMPSTEFKFTVSGINDRRGDTGPL
ASFMPKPYILAMSVPSDGHSHSSRKKRSPAAEPTCDEKTETCCMRKLYIDFRKDLGWKWI
HKPKGYFANYCMGSCAYIWNAENKYSQILALYKHHNPGASAQPCCVPQVLEPLPIMYYVG
RQYKVEQLSNMIVKNCKCS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaactttgtttagcactagctgttgtttgcatggcaactgtaatcggggccatg
tccacctgcaagactttggacctagaggtagcgaagaggaagcgaatcgaggccattcgt
ggccaaatcctaagtaagctgcgtatggctaaggagcctgaacctgaagaggacaccaaa
gaagagagcatcccagaaaatatcatctcgctctacaacagcacagtggagaccaccagg
gatcagcaaaacgaacaggctcccgcctcataccagcaggaagaagaggagtactttggc
aaagagatgcataaatttgaaatgactaagggggagagtaatggaacaggtaaaaagcag
ttgtactttaacatcagtgaaatcaagcagagtatcccggactacaggctgctgtcacag
gccatgctcaggctacgtgtgaaagagacttcaatccaaaatgggtccccacagagactg
gagatctataagggtgtgggcaatgcagcaaaatacctggacttccatgaaatcactaat
gatttaaataataaatggatatccttcaacgtgacagctacaatcaaagagtggctccag
ttacccgaaaatgaacaagcatttgagctgaggctgtattgtgcatgtgggatgccttcg
actgaattcaaatttaccgtatcaggtataaatgatcgaagaggagacacaggtcctcta
gccagttttatgcccaagccatacattttggccatgtctgttccttctgatggccatagc
cactcatcacgcaaaaaacgatctcctgctgcagaaccaacatgtgatgaaaaaacagag
acctgctgcatgcggaaactctacattgatttccggaaggatcttgggtggaaatggatc
cataagcctaaaggatactttgccaactactgcatgggctcatgtgcctacatctggaat
gctgagaacaaatactcacagattttagccctttacaagcatcataaccccggtgcgtcg
gctcagccatgctgtgtacctcaagtcctggaacctcttccaatcatgtattatgtgggc
agacaatacaaggtggaacagctgtccaacatgatcgtgaaaaactgcaagtgcagttaa
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