Clarias gariepinus (North African catfish): 128512899
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Entry
128512899 CDS
T10780
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a isoform X1
KO
K09063
transcription factor E2-alpha
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128512899 (tcf3a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
128512899 (tcf3a)
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Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
128512899
NCBI-ProteinID:
XP_053342372
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Position
25:19205148..19237355
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AA seq
612 aa
AA seq
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MSDTGIRMGTAGTDKELSDLLDFSAMFPLPGMTGKNRPSAQAGGQFGGSGLEDRSGSGSW
GSADQNNSSFSTRAFDSVGHYGEHESMSPSSMYSSGIAGKSDRGPYNFSAQQFLPGGEMS
MSSPDGLSPSGVKATSPFYGSYPATRRRPLEGMLDTPPKKIRKVPPGLPSSVYPAAPSDD
YNQENAGFPASKTGSVYPGNFYVQDGLQDHWAQPGYSSMSHLGQSGPFAAINPQDRLKRQ
PLPLSPPSYPHPGSEVNGGFQSPYTPPINGSDGIMGNRGSAAGSSGDEIGKALASIYPSD
NNNGSNFSSAPPTPVGSPQNIAAPASQWPRGSTQSAQSPSFEGGLQALQSKMEDCLGEAL
HVMRNHAVGSGLGAEMHTLLNAAGAVAGLSSLSQSFSLHGRVPSLVPNHHEEAASLTPAS
ALLHGQHTATQAPASSQPEGFNSLPGSLPRSSSTDIKREDKEDDENCSIIDKSDDEKKDG
KMNRTRTSCDDEEDDEDLPAEMKAEREKERRVANNARERLRVRDINEAFKELGRMCQLHL
NNEKPQTKLLILHQAVNVILSLEQQVRERNLNPKAACLKRREEEKVTGMGADPQMQLGGG
HPGLGSDGHTHM
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccggcattaggatgggcaccgcaggcacggacaaggagctcagtgatctc
ctggacttcagcgccatgtttcctcttccggggatgactgggaaaaacagacccagcgca
caagccggaggtcagtttggaggctcaggtttggaagatcggagtggatccggatcctgg
ggctcagcagatcagaacaattcatcttttagtacacgggcattcgacagtgtgggccac
tacggtgagcacgagagcatgtcgccttcatcgatgtacagctcaggaatcgcagggaaa
tcagacagaggaccttacaacttttctgcacagcagtttctgccaggtggtgagatgtcc
atgtccagtcctgatggcctgtctccctctggtgtaaaagccacatcaccattctacgga
tcttacccagccactcgtagaaggcctttggaaggaatgctcgataccccgccgaagaag
atcaggaaagtaccacctggtctcccatcctcggtttatccagcagctcccagtgacgac
tacaaccaggaaaacgcaggtttcccagcttcgaaaaccggaagtgtctaccctggaaac
ttctatgtacaagatggtcttcaggaccactgggctcagccggggtattcctccatgtcc
cacctcggccagtctggcccctttgctgcaataaaccctcaggatcgcctgaagagacag
cccctgcctctgtcccctccgtcctaccctcaccctggcagcgaggtaaatggtggtttc
cagtctccatacacacctcccatcaatggatcagacggcatcatgggcaatagaggcagt
gcggcaggaagctcaggggatgaaatcggaaaagctcttgcttcaatttacccttcagac
aacaacaacggcagcaacttctcctccgctccacctaccccggtgggctctcctcagaac
atagcagcccctgcttcccagtggcccagaggatcgactcagtctgcacaatcacccagc
tttgagggaggactgcaagcgctgcaaagtaagatggaggactgtctgggtgaagccttg
catgtgatgcggaaccatgcagtcggttcagggctgggcgcagagatgcacaccttgctg
aatgccgctggagcagttgcaggtctgagctctctgagtcagagcttttccctgcacggc
agagtgcccagcctagtgcccaaccaccatgaggaggcggccagcctgactccggccagc
gccctgttacacgggcagcacactgccacacaagcccctgccagctcgcagccagagggc
ttcaacagtttgcctggaagtttgccccggagctccagcacagacatcaagcgtgaggac
aaggaggacgacgagaactgctccataatagacaagtctgatgacgagaagaaagacggc
aagatgaaccgcacacggacgagttgtgacgacgaggaggacgacgaggacttgccagcg
gagatgaaggcggagcgggagaaagagcggcgcgtggccaataacgcgcgagagcgttta
cgcgtgcgcgacatcaacgaggccttcaaggagctcggtcgcatgtgccagctccatctg
aacaatgagaaaccgcagaccaaactgctgatcctgcaccaggccgttaatgttattctc
agcctggagcagcaagtgcgagagcgtaacctcaacccgaaggcggcatgtctgaagaga
agagaggaggaaaaggtgaccggcatgggggcagatcctcagatgcagctaggaggaggc
catcctgggctgggcagtgacgggcacactcatatgtaa
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