Clarias gariepinus (North African catfish): 128513896
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Entry
128513896 CDS
T10780
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128513896 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cgar04050
]
128513896 (tnfrsf11a)
04090 CD molecules [BR:
cgar04090
]
128513896 (tnfrsf11a)
Cytokine receptors [BR:
cgar04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
128513896 (tnfrsf11a)
CD molecules [BR:
cgar04090
]
Proteins
128513896 (tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
128513896
NCBI-ProteinID:
XP_053343424
LinkDB
All DBs
Position
26:complement(19988067..20001836)
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AA seq
575 aa
AA seq
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MRAYFSTSWIFRGWIYCLIFALCIQRKHAKPICNDLQYLQGNKCCSKCKPGTYLSATCTE
NEDTKCRPCGKNEYQSKYTTEKRCYPQKFCDEGKGFYRPNPSSTTELEPCQCKEGFQCTT
SYCEFCDRIKPCPPGQGLAGETGKQACKDCDYGFFSDSNSVEACKKWTDCKAIGKSEEKP
GSHVADVVCGPPFEPPPSWAVVAIPCAIIVMCAVILSCYKDKLNILSVNLRTCVQNIKQS
RIQQETLTPPYNSNRPLYEITSQVDEGTPEYLSMCSKSVRDSPGLDKAQGNKKTPYSSKL
EKDRADGSSGSSAEGSESPCTPHPGSSCSCLIMKEPVEVGENEDCSELVATGLAGCCSCA
QVDNVVPEPRKDDNGSLKEPPLCGNFYTENVPGCLQGSQELYLDYSSGAGKEVMSVVRDL
HSDTSAYERNEPQCCSIESTAVLSSLSTSNNQGLSLISSADNNQPKADADLEIQSQSLET
ALTCAQVTGNNNTTFISTGQVMNFTGDVIMVYVSQTSLGSSGDEEPYASPVQEQSAECAN
QNLPKSYQRTDGHERHIPVQEMTNQRLQRNQNLSV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagagcatacttctccaccagttggatatttcgaggctggatatactgcctgatcttt
gccttatgcatccagagaaaacatgccaaaccaatttgcaacgatttgcagtacctgcaa
ggaaataaatgctgtagcaagtgcaaaccaggaacgtatctgtctgcaacatgcaccgag
aatgaggacactaagtgtcgtccatgtgggaagaacgagtaccagtcaaaatataccact
gagaagaggtgctatccgcagaagttctgtgacgaggggaaaggattttaccggccgaac
ccgagcagcaccactgagctcgagccgtgtcagtgtaaagagggcttccagtgtaccacc
agctattgcgagttttgtgatagaatcaaaccctgtcctccaggccaaggactcgcagga
gagactggaaaacaggcatgtaaggactgcgactacggctttttctcggattccaactcg
gtcgaggcgtgcaagaaatggacagactgtaaagccattggcaagtccgaggaaaagcca
ggcagtcatgtagcggatgtggtgtgtggaccaccctttgagcctccaccatcgtgggct
gttgtggcgataccctgtgctataatcgtcatgtgtgctgtgattctttcttgctacaag
gataaactgaacatcctctcagtcaatctacgaacttgtgttcagaacattaaacagagc
agaatccaacaagagacactaacaccaccgtacaatagcaaccgccccctgtatgagatc
acatctcaggtggatgaaggcactccagaatacctgagcatgtgctccaaatctgttcgt
gattcccctgggctagacaaggctcaaggaaacaagaagaccccatactcctccaagctg
gaaaaggaccgggctgatggatcatcaggcagctctgctgagggatctgagagtccatgt
accccacatcctggcagctcctgcagctgcttgatcatgaaggagccggtggaggtgggc
gagaacgaggactgcagtgagctggtggcgaccggcctggctggatgctgctcctgtgct
caggtggacaacgtggtccccgaaccaaggaaggatgacaacggcagcctgaaagagcct
cctctatgtgggaacttttacactgagaacgttcctggatgccttcagggctcccaggag
ctctacctggactatagcagtggagctggcaaggaggtcatgtcagtggtcagggattta
cacagcgacacgagcgcttatgagagaaatgagccgcaatgctgcagcatcgaatccacc
gccgtactttcgtcgcttagcacaagcaacaaccaggggctgtcgctcatctccagcgca
gataacaaccagcccaaagctgatgcggatttggaaatccagagccagagcttggagact
gctcttacatgtgctcaggtgacgggaaacaacaacaccacattcatctcgaccggccag
gtgatgaacttcactggtgatgttatcatggtatacgtcagccagacgtcgctgggcagc
agcggagatgaagagccctacgccagcccagttcaggagcaatcggctgaatgtgccaat
cagaatctgcccaaatcctaccaacgcacagatgggcatgagagacatataccagtgcag
gaaatgactaaccagcgccttcaacgtaaccaaaacctctctgtctga
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