Clarias gariepinus (North African catfish): 128513991
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Entry
128513991 CDS
T10780
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
cgar04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128513991 (flt1)
04020 Calcium signaling pathway
128513991 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128513991 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgar01001
]
128513991 (flt1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
128513991 (flt1)
Protein kinases [BR:
cgar01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
128513991 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
Ig_2
ig
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_4
C1-set
Ig_5
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
128513991
NCBI-ProteinID:
XP_053343571
LinkDB
All DBs
Position
26:complement(22040093..22066573)
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AA seq
1281 aa
AA seq
DB search
MLEIFLLMLCGLTSRVLTKDAENKGRFNSPVLDVTQRQIVLEKNQTLQLNCRGRWELEWV
FPSNANKSHPSVRVEHNLCGRRTNHYCSRLILSPVLAKHTGSYRCRYADKHHKNTSVYVF
IPDSQQPFVKVQKESPDVVYMREGQDLVFPCRVTDPDTKVSLIKFPDRRLGTDHRNIIWN
NRKGFVVRSPTYFYIGLFFCETTIGGITYTNKFLTYRPVNKIQKVYLNSTGLEQALQGER
LALNCTVTAEWNSRVNIDWNYPGKANNGVSITRRITQSRTNVVFYSILTVPKLQKADKGV
YTCLVTSGPAKREVNTSVIVHDQPFIRLKRKGSPLVQVYAGQKSFRLSPKLQAFPEPEVI
WLKDGRVAAEQCSRYHVDGYSLVIRDVAKEDAGVYTILTRIQQFGLHKNLTLPLLVKVKP
QIGEKAVAGRDTVTMPRYSRQVFRCTAHGVPSPRIQWLWRPCPPKGLCEDLASSSSWTAV
REGTAVTSTYNPVLSVRHTQEVLQGKNKTIGTLTVGKALISGIYRCVASNSVGTDELDIR
FYVTDVQGGFSVSGDSEEGPREGRDHHLSCVANKHLYSNMSWVRVTGNSTGSPSLVGELT
EGEYSLTLRLTLANLTAQDSGRYRCSATHLVTGQQSYQEELVMVAVLEAPVLLQNLSDCS
VNISNSVTLQCPASGVPRPLITWYKDRRKLKQVSGIMLAPEDGTLHIDRITAEDEGMYTC
EASNERGSVESSAYISVENSESFSLEIPLLACTCVVATLFWLLLTLLIRKLRQPNSRNSK
TEYLPIILHQGEGPLDEHCDRLQYDAEKWEFPQERLQLEKPLGRGAFGRVMQASAFGISN
STGCTTVAVKMLKEGATPSEHKALMTELKILNHIGHHLNVVNLLGACTRPGGPLMVIVEY
CKYGNLSSYLRSKRNVFTLNRVNGEKEQGQQDECGSCVESQNSQKDSAGLEGERKEENEV
DNGPVLCSNTPLHLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFG
LARDLYKDPDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPYPG
LNLDEEFCHRLKQGTRMRAPEYSTPEIYSTMLMCWEKNPADRPTFTELVGMLGDLLQARV
QQDGKDYIPVNMFVSGESGAEHLDYRDTHQGSPCYINTKIDSVATFEEDLNREGPEQDSQ
SDSGMVLPSEELIQLTFTDKPKTKKITRFFLKSQQQDKTSPAPALPCVSGAPCGQGENND
IAAPCGSPPPDYNTALFYSSL
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgttggagatctttttattgatgctgtgtggactgacgagccgtgtcctgaccaaagat
gcagaaaataaaggaaggttcaactctccagtgctggatgtaactcaacgacagatcgtc
ctggagaagaaccagacgctgcagctgaactgcagggggcgatgggagctggagtgggtg
ttcccctcgaatgcgaacaagagccacccgagtgtccgtgtcgaacataatctttgtggc
aggcggacgaaccactactgcagccgccttatcctcagccctgtgttagccaagcataca
ggctcctaccgctgtcgctatgccgacaagcatcacaaaaacacctctgtctacgtcttc
atcccagatagccagcagccatttgtaaaggtgcagaaagagagcccagacgtggtctac
atgagggaaggacaagacttggtgttcccctgcagggtcactgaccctgacactaaagtc
tcgttaatcaagtttcctgaccgaagacttggcactgatcacaggaacatcatttggaac
aacagaaagggctttgttgtccgaagtcccacgtacttctatattggcctttttttctgt
gaaaccaccatcggtgggataacgtacaccaacaagttcttgacttacagaccagtgaac
aagatccaaaaggtgtatctgaacagcactggcctggaacaggctctccaaggagagcgt
ctggctttgaactgcactgttactgctgagtggaactccagagtaaacatcgactggaat
taccctggaaaggcaaataatggggtctcgatcactcgtcgtataacgcagagcaggacc
aacgtggtgttctacagcattctcactgtccccaaactgcaaaaggctgataaaggagtc
tacacgtgccttgtgacaagtggcccagcaaaacgggaagtcaacacctccgttatagtc
catgatcagcctttcatcaggttaaagcgtaaaggcagtccactggtacaggtgtacgca
ggacagaaatcctttcgcctgtcccccaaattacaggctttccctgaacctgaagtcatc
tggctgaaagatgggagggtagcggctgagcagtgttcacgttaccatgtggacggctat
tcgctggtgattcgggacgttgccaaggaggatgcaggggtttatacgatcctcacacga
atccagcagtttggtcttcataagaacctcacgctcccacttctggtcaaagttaagcct
cagataggggagaaagctgtagcaggacgggacacagtgaccatgccacggtacagcagg
caagtcttccgctgcaccgcccacggcgtcccatctcctcgaatccaatggctctggcgt
ccctgccctcctaaaggcttatgtgaggacctggcttcctcgtcctcctggaccgcagtg
agagaggggacggcagtcacgtccacctacaatcccgtcctgagcgtcagacacacacag
gaagtgttgcaagggaagaacaagactataggtactttaacagttggcaaggcattaata
tctggcatctaccgctgcgtggcttccaactcagtgggcacagacgaactggacatccgc
ttctatgtcacagacgtccagggaggcttcagcgtctccggggactccgaggaggggcca
agggagggcagggaccatcacctgtcctgtgtggccaacaagcacctgtattccaacatg
tcatgggtcagagtgacgggcaactcgacaggcagcccatctctggttggagagctgacg
gagggagaatattcgctcacactgcgcttgacgctagcaaacctgacagcgcaagactct
gggaggtaccgctgctctgccacacacctggtcacggggcagcagtcatatcaagaggaa
cttgtgatggttgcagtcctggaggctccagtgctgctgcagaacctcagcgattgcagc
gtgaacatcagcaactccgtgacccttcagtgccctgccagtggagtgccacgacctctg
atcacatggtacaaggaccggaggaagctcaagcaggtgtctggtatcatgctggcgcca
gaagatggcactctgcacattgaccggatcactgctgaggatgagggcatgtatacatgt
gaggccagcaacgagagaggatctgtagaaagctcggcctacatttcagtcgaaaattcg
gagtcgttctccctggagatccccttgttggcctgcacctgtgtggtcgccacgctcttc
tggctgctcctaacgcttctcattcgcaagctcagacagccgaactcaagaaacagtaag
acagaatacctgccaatcatcctgcaccagggggaggggcctctcgacgaacactgtgac
aggctacagtatgacgcagaaaagtgggagttcccgcaggaacgccttcagctggaaaag
ccactgggacgaggggcgttcggcagagtgatgcaggcgtctgcttttggcatcagcaac
tcaaccggctgcaccacagtggccgtcaaaatgctaaaagagggagccacaccgagtgag
cacaaggcactaatgaccgagctgaaaatcctcaaccatatcggacatcacctgaacgta
gtcaatctcctcggggcctgcaccagaccaggaggtcctcttatggtcatagtggaatac
tgcaagtatggcaacttgtcctcatacctgaggagcaagaggaacgtgttcactctaaac
agggtgaacggagagaaggaacagggacagcaggatgagtgtgggagctgtgtggagagc
caaaacagtcagaaagacagcgctgggttggagggtgaaagaaaagaggaaaatgaggtg
gataacggtcctgtcttgtgctcgaacactcctctacatctagaggacctgatctcatac
agcttccaagtggccagaggcatggagttcctcgcttcacgcaagtgtatacacagagac
ctcgctgcccgaaacatcctcctgtcagaaaacaacgtggtgaaaatctgtgactttggg
cttgctcgagacctttacaaagaccctgattacgtgcgcaagggagacgctcgtttaccg
ctgaaatggatgtctccggaatcgatcttcgacaaggtctttaccactcagagcgacgtc
tggtcttacggtgttctgctctgggaaatcttctcacttggggcgtcgccgtatccagga
ctgaaccttgatgaggagttttgccacagactgaaacagggaactcggatgcgcgctcca
gaatacagcactcctgaaatctacagcacaatgctgatgtgctgggagaaaaacccggcg
gaccgacccaccttcactgagctggtgggaatgctaggagatcttctccaggcccgcgta
caacaggatgggaaggattacatcccggtcaacatgttcgtgtcaggagagagcggtgcc
gaacatctggactacagagacacacaccaaggaagcccgtgctacatcaataccaaaatc
gattctgtcgctacatttgaagaggacctgaaccgagaaggcccagaacaggattcgcag
tctgacagtggcatggttctcccgtctgaagagctcattcaactcacatttactgacaag
cccaagaccaaaaagataaccaggttctttttgaaaagccagcaacaggacaaaacatcg
cccgctcctgctctcccctgtgtgagtggcgccccctgtggccagggggagaacaacgac
atcgccgccccctgtggttctcctcctcctgattacaacactgctctgttctactcttcg
ctttaa
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integrated database retrieval system
