Clarias gariepinus (North African catfish): 128514201
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Entry
128514201 CDS
T10780
Symbol
ext1a
Name
(RefSeq) exostosin-1a isoform X1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgar01100
Metabolic pathways
Module
cgar_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
128514201 (ext1a)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
128514201 (ext1a)
Glycosyltransferases [BR:
cgar01003
]
Glycan extension
O-Glycan
128514201 (ext1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
128514201
NCBI-ProteinID:
XP_053343912
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Position
26:complement(3237240..3299813)
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AA seq
739 aa
AA seq
DB search
MQAKKRYFILFSASACLVLLLYLGGAQIVAGPPGGGVGSGRHGLEPRWPRFVEHLQTFRT
LDRTENEDGVPTSPRDKRDAVSGVYKGRMCRMDSCFDFSLCKRNGFKVYVYPQEKGEKLS
ESYQNILASIESSRFYTTDPGQACLFVLSLDTLDRDQLSPQYVHNLKAKLQNLNLWNDGR
NHLIFNLYSGTWPNYTEDLGFDIGQAMLAKASISTENFRRNFDVSIPLFSKDHPRTGGDR
GYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNSEDVVLLTTCKHGKDWQKHK
DARCDRDNAEYDKYDYKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVVLSNGWELPF
SEVIDWNTAAVIGDERLLLQIPSTIRSIHQDKILSLRQQTQFLWEAYFSSVEKIVLTTLE
IIHDRVLQHLSRSSVMWNNLPGGLFTLPQYSTHLGHFPFYYAALGIKPQQRFSAVIHAVT
PLVSQSQPILKLLSSVAKSQYCAQIIILWNCDKPLPAKQRWPATSQPVVVIEGESKVMSS
RFLPYSTIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDVNKERWGY
TSKWTNDYSMVLTGAAFYHRYYNYLYTNYLPVSLKSMVDQLSNCEDILMNFLVSAVTRMP
PIKVTQKKQYKETMMGQQTSRASRWADPDHFAQRQTCMNKFASWFGSMPLVHSQMRLDPI
LFKDQVSILRKKYRDIERL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaagcggtatttcatcttgttctccgccagcgcctgtctcgtactgctg
ctgtatctcggtggggcgcagatcgttgcagggcccccaggtggcggcgttggcagcggc
cggcatggcctggaacctcgctggcccaggttcgtcgagcacctacaaactttccggacg
ttggatcggacggaaaacgaggacggcgtcccgacgtcgccaagggacaagagagacgct
gtttccggcgtgtacaagggtcggatgtgccgcatggactcgtgctttgacttctcgttg
tgcaagaggaacggctttaaagtttacgtctaccctcaggagaagggcgagaagctctct
gagagctaccaaaacattttggcttcgatcgagagctcgaggttttacacgaccgacccg
ggccaggcttgcttgttcgtcctcagcctcgacaccctggaccgggaccagttgtccccg
cagtatgtccacaacctgaaagccaaactccagaacttgaacctatggaacgatggcagg
aatcacctgatctttaatttgtactcggggacgtggccgaattatacagaggatctgggg
ttcgacatcggccaggccatgttagccaaggccagcatcagcacggagaacttcaggcgc
aactttgatgtttccatacctctgttctctaaagatcacccaaggacaggaggggacagg
gggtacttgaaatacaactccatcccaccgtttaggaagtacatgctggtatttaagggg
aaacgctatttgacagggatcggttcggatacgaggaacgccctgtaccacgtccataac
tctgaggatgtggttctgctgaccacctgcaagcacggcaaagactggcagaagcacaag
gacgcgaggtgcgaccgggacaacgccgaatatgacaagtatgactacaaagaaatgttg
cacaactctaccttttgtctggtgcctagaggacgccgcctgggctccttccgcttcctc
gaggctttacaggccgcctgtgttcctgtggttctcagtaacggatgggagctccccttc
tccgaggtcattgactggaacacggctgccgtcatcggagacgagaggctgcttttacag
atcccctctactatccgctccattcaccaggacaagatcctttcgctccggcagcagacg
cagtttctttgggaggcgtacttttcctcggtagagaagatcgtgctcactacactggag
atcatccatgaccgcgtgttgcagcacctaagccgcagcagcgtgatgtggaacaacctg
cccggaggtctcttcaccctgccgcagtactccacccacctgggacacttccctttctac
tacgcagcgctcggtatcaaaccgcagcagaggttctcggcagtgattcacgctgtaacg
ccgctggtgtcgcagtcgcagcccattttaaagctgctatcatctgtggctaagtcccag
tactgtgctcagattatcatcctgtggaactgtgacaagcctcttcctgcaaagcagcgc
tggccagcgacctctcagcccgttgtcgtgatcgaaggcgagagtaaggtgatgagcagc
cgtttcctgccctacagcaccatcgtaacagatgccgtcctgagtctggacgaggacacg
gtgctctccaccaccgaggttgatttcgccttcactgtttggcaaagtttcccagagagg
attgtgggatatccagccaggagccatttctgggacgtcaacaaggagcgctggggctat
acctctaaatggaccaatgactattcgatggtgctgaccggagctgctttctaccacaga
tattacaattacttgtatacaaattacctgccagtcagcttgaagagcatggtcgaccag
ctatcaaactgtgaagatatcctcatgaacttcctcgtgtctgctgtcaccaggatgccc
cccatcaaagtcacgcagaagaagcagtacaaggagaccatgatgggacagcagacgtcg
cgagcctctcggtgggcagacccggaccacttcgcccagcggcagacttgcatgaacaaa
tttgccagctggtttggcagcatgcctctcgtgcactcccagatgagactggaccccatt
ttgttcaaggaccaggtgtctatactgcgcaaaaaatacagagacatcgaaagactctaa
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