Clarias gariepinus (North African catfish): 128515736
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Entry
128515736 CDS
T10780
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
cgar04145
Phagosome
cgar04218
Cellular senescence
cgar04514
Cell adhesion molecules
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128515736
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128515736
04145 Phagosome
128515736
09143 Cell growth and death
04218 Cellular senescence
128515736
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128515736
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128515736
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128515736
Exosome [BR:
cgar04147
]
Exosomal proteins
Proteins found in most exosomes
128515736
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Antigens
128515736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
Motif
Other DBs
NCBI-GeneID:
128515736
NCBI-ProteinID:
XP_053345868
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All DBs
Position
28:complement(7800344..7805747)
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AA seq
338 aa
AA seq
DB search
MYNVPIIYTFVFLLHLPLSRCADFDSLSWNTFSSNGLGLPSFIQTMTVNDVTLFYYDSNM
RSTPPYPEWVKNTAAEPHWEEAIADIYVDRVILSVALQTAILEFNRTGTFSEKNVYQTYG
HCDLYPDGTIKASLTHAFNGNDFISLDIDNKRIIASVPQALKYKRIREDDIIYHESLVSF
YKKYCFDRLRVFLKHAPQLSIKNAPEVRVFQRQRAGSNILICHVTGFYPKAVQVKWFGAD
FQLLDDEINDVLPNGDSTFQTRRSLIIPEKGTEDQLYTCVVYHSSLREGNITVTWDKEEI
PFKLPVWILLGCMFMLTVVGLVTRYFYKTNATREQDDY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacgtaccgattatttatacttttgtctttctcctacaccttcctctgtcgcgt
tgtgcagattttgattctctcagttggaataccttcagctctaatggcctcggccttcct
agtttcatacagactatgacggtgaatgatgtaacgctcttttactatgacagcaacatg
aggtcgacaccaccatatcctgaatgggttaaaaacactgctgctgagccacactgggaa
gaggctattgcagatatatacgtagacagggtaattctttctgtagcactgcaaacagcc
atattggagttcaaccgcacaggcacattttcagaaaagaatgtataccaaacctacggt
cactgtgacctctatccagatggcacaatcaaggcatcattaacccatgcattcaatgga
aatgactttataagtttagatattgacaataagaggataattgcttctgttcctcaagct
ctcaaatataaacgtatcagggaggatgatataatctaccatgaaagcttagtgtctttc
tacaaaaagtactgttttgaccgccttagggtgttcttaaaacatgctcctcaactcagc
ataaaaaatgctccagaggtcagggtctttcaaaggcagagagcaggttccaacatcctc
atctgtcatgtgactggattttaccccaaagcggtacaagtgaagtggtttggggcagat
tttcagctgctagatgatgaaataaatgatgttctgcctaatggtgacagcacatttcag
acccgaagaagtttgatcatacctgaaaagggcacagaagatcagctctatacctgtgta
gtgtatcacagcagcctcagagagggaaatattacagtcacatgggataaagaagagata
ccatttaagcttcctgtttggattctattaggctgcatgttcatgctgactgtagttggg
cttgtaacacgatacttctataaaactaacgccactagggaacaagatgactactga
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