Clarias gariepinus (North African catfish): 128515916
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Entry
128515916 CDS
T10780
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128515916 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128515916 (setdb1a)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
128515916 (setdb1a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128515916 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128515916 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_5
SET
DUF5604
Pre-SET
MBD
Tudor_4
Tudor_3
Chromo_MORC2_6th
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-GeneID:
128515916
NCBI-ProteinID:
XP_053346148
LinkDB
All DBs
Position
28:complement(17518877..17535518)
Genome browser
AA seq
1361 aa
AA seq
DB search
MKTEEEEVKVVMTQEELQEWVREQVAKNRPLAHRRTQMAQVEDWLKRRERDMAYTQLLYN
SACQSVLECESVMKGLYGMLGLEYRDTDSEEEGEGPRATEDVNQLTDDLDNGDDDCGADD
DDYVVFDLGAILPEAALKDEPKDIGLSPELNCSMRTLDHSVKESEDGDPAFEVKPPSQTT
PKENVPSNNPVSTLQTAESPAPTPDPPPCDFPENKSFPPASPGTSTAINDPAETSSLTTI
SNAFSPSKGNTNISSASSASSSSASKENTETPAQPPAPSPTSTIPENPPTAPKSSKRVSQ
ANPKPGTSSKNTKATPTSDTSRTTTSKEKPKQASPKPNSMPSSTTTPSTAKVQAAPEEKA
KGPIPKQSEKPETKSTSSSTHPGTTTSDRASKQVIPTKPPDSKEVSHNAPVTLITPAAHT
EVPARVQKEVELRVNMSVLGRRRTKTWHQGTILDVKTTESGQRYKILFDGGKGKSVLSAH
HLACVEPPLLKDLFVGCRVVACYKEDNQSWLHAAVVAEMPDRRNRMRFLVFFDDGRPSYI
SLPDLHLVCKPMANMCDDIEDEVWRADVQEYLKAYPNPIFVVMRAGQDTNVERDGHLETC
SVIQLDGSLIQVCYKKSKDKEWIYKGSNRLEQVQRIKMRKAEERKEQTGNKAGFSHIQKI
TKQPTYTTLSTTTAAHATFSTRVTAKHESSKTVSAPSVPQALTPVTTTSSTAKTFCDKLS
PRIILSRITLPSAPTSKKPSAQTELTVTVSSNKGIKRHASEVDDTRSPSALVPAVEPRLK
YVPHRCCPACLNSVRPMQRDQHRGQNPLFIPLLHGFRRMTARRRVDGKMSFHVFYRAPCG
RGLCEMEEVQAFLFESRCDFLFLDMFCLDPFVLVKRAMLPSYMASRPRLCLPDISGGKEA
VPVSCVNELNDVPPPPLAYTSHRIPAPGVFINTNLDFMVGCDCTDGCRDRSKCACYQMTI
EATSLFSGGPVDVTAGYTHKRLPRYVPTGVYECNPLCRCDPCLCSNRLVQHGLQLRLEVF
MTQHKGWGLRCLDDVSKGTFVCVFTGKVVKDDMVNTESAMTGNEYLANLDYIEGVEKLKE
DYESEAYCSETEGEIDKKTLIRMTTGALKKHDVFQLDSSSSSGEEKEEATQQKTTPDKME
IKTTRDYSDNDDDVDDEDFKISSGDEMEVKLSSDYTRSYTTRRNAKTPGKGECYNTQTSS
EEQTEVSVFLAKKMRKEGPGERKLGFAKKSTRPFAIKSSHRRVTPQAEPEKCMQEKQMEH
EHGRKCTRSLFDGEKACYLIDAKQEANLARYINHSCSPNLFVQNVFVDTHDLRFPWVAFF
TSKRIRAGTELTWDYSYEVGSVEGKLLLCCCGSANCTGRLL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgaagaagaggaggtgaaagtggtcatgacgcaggaggagctgcaggaatgg
gtgcgggagcaggtggcgaagaataggccactggctcacaggcggacgcaaatggcacag
gtggaagactggctgaagcggagagagagggacatggcatacacgcagctgctatacaat
agtgcctgccaatcagtccttgagtgcgagtctgtgatgaagggcttatatggaatgctg
ggactagagtatcgggacaccgactcagaggaagaaggagaaggacccagagctacggaa
gatgtaaatcagctgacagatgatttagacaatggagatgacgattgcggtgctgatgat
gatgattatgtcgtctttgatttgggggccattcttcctgaagcagcgttgaaagacgaa
ccgaaggacattggattgtcaccagagttgaattgctccatgagaacgttagatcattca
gtgaaagaatctgaggatggagaccctgctttcgaagtcaaaccaccatcgcaaacaacc
cccaaggaaaatgtaccttctaacaaccctgtatcaaccttacagactgcagaaagcccc
gcaccaactcctgatccaccaccctgtgattttcctgaaaacaaaagttttcctccagcc
tctccaggcacttcaacggccattaatgatcccgccgaaacctcttcactgaccaccatt
tcaaatgcattttccccatccaaaggtaatacaaacatatcatctgcatcatctgcatca
tcatcatcagcttcaaaagagaacactgaaactccagcgcaacctccggcaccctcccca
acgtccacaatcccagagaatcctccgactgcaccgaagtcttcaaaaagggtctcccag
gccaacccaaaacctggcactagtagcaaaaacacgaaagcaacaccgacctcggacaca
tctcgtacgaccacaagcaaggaaaagcccaaacaggccagtcccaaacccaacagcatg
ccttcaagcaccaccacaccatccaccgccaaagttcaagctgcacctgaagaaaaagct
aagggtcccatccctaaacaaagcgaaaaacctgagactaaatctacttcttccagcact
caccctggtaccacgacttcagacagggcttccaaacaagttattcctaccaagccacca
gattctaaagaagtatcccacaatgctccggtcactctaattactccggccgcacacact
gaggtgcctgctcgtgttcagaaagaggtggagctgagggtcaacatgagcgttctggga
agaaggaggactaaaacatggcaccaaggcaccattttggatgtcaaaacaaccgagtcc
ggtcaaaggtacaagatcctgtttgacggaggtaaagggaagagtgttttatctgctcat
cacttggcctgtgtcgagccgcctttgctgaaggacctgtttgtggggtgtcgagttgta
gcctgttataaagaagacaaccagtcttggctccacgctgcagtagtagcagagatgcct
gaccgcaggaaccgtatgaggttcttggtgttcttcgatgatggccgtccgtcctacatc
tccctgccagacctccatctggtttgtaagccaatggccaacatgtgtgacgacattgaa
gatgaggtgtggcgtgcagatgtccaggaatacctaaaggcttatccaaaccccatcttt
gtggtgatgcgtgcggggcaggataccaacgtggaacgtgacggacatctcgagacctgc
agcgtcattcagttggacgggagcttgatccaggtctgctacaagaaaagtaaggacaaa
gaatggatctataagggctctaatcgattggagcaagtccaaaggatcaaaatgcgaaag
gctgaggagaggaaggaacagactggaaataaagctggatttagtcacattcaaaagatc
actaaacaacccacctacaccaccttaagtaccaccactgctgcccatgctaccttctct
acaagagtaaccgcaaaacacgaatcctcaaaaactgttagtgctccaagtgttccccag
gcgctcaccccagtcacaacaacctcaagtacggcaaagacattctgcgataaactatca
cctcgcatcatcctcagcaggattaccttgccatcggctccgaccagtaagaaacccagc
gcacaaaccgagctcacggtcaccgtttcatctaacaaaggaattaaacgccatgcttct
gaggtggacgacaccagatcgccgagcgctctcgttccggctgttgagccccggctgaag
tacgtacctcatcgctgctgcccggcttgtctgaactctgtgcgtccgatgcaaagggat
caacaccgcggccagaatccactgtttatcccgctgctgcacggctttcgccgcatgacc
gcaagaaggcgtgtagacggaaagatgtcttttcacgtcttctatcgtgccccatgtggg
cggggcctgtgcgagatggaagaggtgcaggccttcctgttcgagtcgcgctgtgatttc
ctcttcctggacatgttctgcctggacccgtttgtgctggtgaaaagggccatgcttcca
tcctacatggccagccgtcctcgtctttgcctgccggacatttcaggagggaaggaggca
gtacctgtgtcttgtgttaacgagcttaacgatgtccctccaccccctctggcatacacc
agtcacaggatacctgcacctggtgtctttatcaacaccaaccttgactttatggtgggc
tgcgactgtaccgatggctgccgagacaggtcaaagtgcgcctgttaccagatgaccatc
gaggccacgtcactgttcagcggtggtcctgtggacgtcactgccgggtacacgcataag
cgactgcccagatacgtccccactggggtgtacgaatgtaaccccttgtgccgctgcgat
ccatgcctgtgcagtaacagactggttcagcacggccttcagctgcgtctggaggtcttc
atgactcagcacaaagggtggggcctgcgctgcctggacgacgtctccaaggggaccttc
gtgtgcgtcttcacaggtaaagtagtcaaggacgatatggtgaacacagaaagtgccatg
accggcaacgagtatttagcaaacctggactacatcgaaggagtggagaaactgaaggag
gattacgaaagcgaagcgtattgctctgaaacggagggagagatcgacaagaagactctc
atcaggatgacaacaggggcgttaaagaaacatgacgtgttccagttggattcgagttcc
agcagtggtgaagaaaaggaagaggcaacccaacagaaaacgactcccgataaaatggag
ataaagacgactcgtgactattctgataatgacgatgacgtggatgatgaagattttaag
ataagctcaggtgacgagatggaagtgaagttgagcagtgactatacaaggagctacact
acacggaggaacgctaagactccaggcaaaggagaatgttataacacccagacatcttct
gaggagcaaacagaggtgtctgtcttcttggccaagaagatgagaaaggaaggtccagga
gagcgtaaactgggatttgccaagaagtctacgcgtcctttcgccattaagtcgagtcac
aggcgagtgacgccacaagcagagcctgagaaatgcatgcaggaaaagcaaatggagcac
gagcacggcagaaagtgcactcggagcctgttcgatggagaaaaggcttgctatctcatc
gacgccaagcaggaggccaacctggcacgatacattaatcatagctgtagtcccaacttg
tttgtccaaaatgtttttgtggacacgcatgatctccgcttcccctgggttgccttcttc
accagcaagcgtatcagggctggaacagagctgacgtgggactacagttatgaagtgggc
agtgttgagggcaagcttctgctctgctgctgcggttcggctaactgtactggacggcta
ctatga
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