Clarias gariepinus (North African catfish): 128515978
Help
Entry
128515978 CDS
T10780
Name
(RefSeq) cathepsin D-like
KO
K01379
cathepsin D [EC:
3.4.23.5
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04140
Autophagy - animal
cgar04142
Lysosome
cgar04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128515978
04140 Autophagy - animal
128515978
09143 Cell growth and death
04210 Apoptosis
128515978
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128515978
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128515978
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.5 cathepsin D
128515978
Peptidases and inhibitors [BR:
cgar01002
]
Aspartic peptidases
Family A1: pepsin family
128515978
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128515978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
TAXi_C
A1_Propeptide
Mu-like_Pro
Motif
Other DBs
NCBI-GeneID:
128515978
NCBI-ProteinID:
XP_053346249
LinkDB
All DBs
Position
28:2788201..2798843
Genome browser
AA seq
392 aa
AA seq
DB search
MKNLGLSVGLMLFIMSSDAVIRIPLRRMTSVRRTLVDNALAKGRLKPRAEAWSEDAAQFP
VEKLSNFMDAQYFGVISIGTPPQNFTVLFDTGSSNLWVPSIHCSFFDLACWLHHRYDSGK
SSTYVKNGTKFAIQYGRGSLKGYFSQDTVTLAGLNITDQMFGEAVTQPGVVFAMARFDGV
LGMGYPILSVGGVLPVFDSIMAAKLLPQNIFSFYINRDPKAEIGGELMLGGFDQQYFDGD
LFYLNVTRKAYWQIEMDAVKVGGTLTLCKDGCQAIVDTGTSMITGPVQEIRALNKAIGAI
PLIMGEYWIDCKKTPSLPVVSFTMGGKTFNLTGEDYIFKSTKFGVTICLSGFMAMDIPPP
AGPLWILGDIFIGRFYTVFDRDNDRVGFALAK
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctcgggctgagtgtgggattaatgctgtttattatgagcagcgacgccgta
atcaggattcccctgcggcggatgacctctgtacggcgcacactcgtcgacaacgcgctt
gccaagggccgactgaaacctcgcgctgaggcgtggagcgaggacgccgctcagtttcct
gttgagaaactctcaaacttcatggacgctcagtattttggagtgatcagcatcgggact
ccaccgcagaactttaccgtcctatttgacactggatcctccaacctctgggttccctcc
atccactgctccttcttcgacctggcctgctggctccaccaccgttatgactctgggaag
tcgagtacctacgtaaagaacggtactaagttcgccatccaatacggcagaggaagtctg
aaaggttacttcagtcaggacactgtcactctggcgggtctgaatataacggaccagatg
tttggtgaagcggtgacgcagccaggcgtggtgtttgccatggcccggttcgacggcgtg
cttggcatggggtatcccatcctgtcagtgggaggagtcctccctgtgttcgactctatc
atggctgccaaactcctgccgcagaacatcttttccttctacatcaacagggaccctaaa
gcagagattggtggagagctgatgctgggtggttttgatcagcagtattttgatggagat
cttttttacctgaacgtcacccgtaaagcatactggcagatcgagatggacgcagtgaag
gtgggaggcacactgacactgtgtaaggatggttgccaggcaattgttgacacgggaacg
tccatgatcacagggccagtgcaggagattcgagctctgaacaaagccattggagccatc
cctctgatcatgggggaatactggattgactgcaaaaagactccttcactgccggtggtg
tcctttactatgggagggaaaaccttcaacctgactggagaggactacatcttcaagtcg
actaagttcggtgtgactatttgtttgtctggcttcatggcaatggacatacctccccct
gctggccctctgtggatccttggagatatttttattggccgtttctataccgtctttgac
cgagacaacgaccgagttggattcgctctggccaagtga
DBGET
integrated database retrieval system
