KEGG   Clarias gariepinus (North African catfish): 128516011
Entry
128516011         CDS       T10780                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03420  Nucleotide excision repair
cgar04110  Cell cycle
cgar04114  Oocyte meiosis
cgar04120  Ubiquitin mediated proteolysis
cgar04141  Protein processing in endoplasmic reticulum
cgar04310  Wnt signaling pathway
cgar04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    128516011 (rbx1)
   04120 Ubiquitin mediated proteolysis
    128516011 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    128516011 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    128516011 (rbx1)
   04350 TGF-beta signaling pathway
    128516011 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    128516011 (rbx1)
   04114 Oocyte meiosis
    128516011 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgar04121]
    128516011 (rbx1)
   03400 DNA repair and recombination proteins [BR:cgar03400]
    128516011 (rbx1)
Enzymes [BR:cgar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     128516011 (rbx1)
Ubiquitin system [BR:cgar04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   128516011 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     128516011 (rbx1)
   Cul2 complex
     128516011 (rbx1)
   Cul3 complex
     128516011 (rbx1)
   Cul4 complex
     128516011 (rbx1)
   Cul7 complex
     128516011 (rbx1)
   Cul8 complex
     128516011 (rbx1)
   Cul9 complex
     128516011 (rbx1)
DNA repair and recombination proteins [BR:cgar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      128516011 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      128516011 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 128516011
NCBI-ProteinID: XP_053346288
LinkDB
Position
28:2712013..2716308
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggatgtggacaccccaagcggcaccaacagcggcgccagcaagaag
cgcttcgaggtgaaaaagtggaacgcggtggctttgtgggcctgggacatcgtcgtggat
aactgcgccatatgcaggaaccacatcatggacctgtgtatagagtgtcaggccaatcag
gcttctgctacatcagaggagtgcacagtggcctggggagtgtgtaaccatgcgtttcac
ttccactgcatttcccgctggctaaagacgaggcaggtgtgtcctctggacaacagggag
tgggagttccagaagtacggacactga

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