KEGG   Clarias gariepinus (North African catfish): 128518059
Entry
128518059         CDS       T10780                                 
Symbol
kdm6ba
Name
(RefSeq) lysine-specific demethylase 6B
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgar03036]
    128518059 (kdm6ba)
Enzymes [BR:cgar01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     128518059 (kdm6ba)
Chromosome and associated proteins [BR:cgar03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128518059 (kdm6ba)
SSDB
Motif
Pfam: JmjC KDM6_C-hel KDM6_GATAL SR-25
Other DBs
NCBI-GeneID: 128518059
NCBI-ProteinID: XP_053347174
LinkDB
Position
1:25637097..25723512
AA seq 1982 aa
MHHTAEKFGVRSSRDPLPLDGINRGPWAPMAGHAWPPPSRCSPGGQPPFLPHLPPSHMMG
LNHASKFYNSGPLGRGGEKLDLPQALLPGVNRDLRMPPAPPRPWDPIGQHYEPLSSEEHA
HLHNGYNSGPSAHLAARANQLLKFAPPPLQHGSRPMPPIPDLWEQSQQQRQPPPPPRGPY
SHSGQLKRQAPPLAEQSVIQHTPLSLNRPNEDRPSPSKKKRSSDSEQQLMGPHQYSGSVA
PSLPLLQQSLFQYTPLPKRAATWNPLERKMGRSEFKDLPKQDMGDCSYKQFPSPKPPSIS
SPPITSVRGYEQGPPPHPHKPSHSPQSLGSSSHNVHINQTTFPFPNNKPSGQNLREHQVI
PTHKVHPSGLRSPGSQAPLQQLSSSLTDRDCPIPTPAHPTAVPYSHPKFQPHPGLVPTTS
PCSNSGTQAAAAQCNPHKPWRNQIKHDNQATELDPYRHTVDAQVSSSSLQQQQSRSGQNQ
DKCTSNARAPVITSTVPSVESSGPPCSVGVYSSVDTMSSVLSTNVSVASTVKSWKTAHAS
ALVSSPNLIPSAQGLQPQEYQRDQSGIVSHPNHQPTAKIQHQEPHLPQQRQDKPHYSPNV
SSAPSSLSSGFQSSGNTVITSKATDNLLQATRSPLHHVQPASSITVNTAQQQSDSLHREL
PHQAAPVLSQVPPAQSYQRPCLQPTISSPQSIEEALKKLDAELQDHMRAEEKRKEQEQKE
RKHNKVRNKRGNEATENLESLLSNSATDPPPPCLSPAITPSTISPPTQTSPPFPWLSRGG
TRPLAPGANPIERSRPPPLTPQTDYAREKQRQREQWNSSITPTSQNTSGISTSIYSSKPT
DSLNKTIQTSSCSSNVSTMLKSSQNIQAVGSVSNPPNLREPPKLYQAFPRDTLPSSSPKA
TSLSSLQKQTSGGLGSLGSSTSSSSGDSDSAQFEEEPSELLPDGLANIMKMLDESIKKEE
ELYSGPSGGGQPDSELPFSLTVAPVKSYSFAPDLMPALKQPSSEEYSTDTHASPPVLSRQ
GSLASPCSRTSSLEEEEDTLKILQKSDSTVSSQSQDGGVGITGSSYRHSDLAKLYGLSER
VKSESEEEEEAEQEDETTSCSPPPMRPHLHQTGVNIMFKNLASMLDTQKYTYRGGPFGRP
PPSAVLGVKYSSSLSLGPDICRQQSTSPTSGSTNHPGFPTQPLKNSTSKQTHPLSPSGST
PERKGDATVSQSDLSGCEEEEGVRKGLMDEEDYSIVKDSTENKRKPKLTTISESSLAELG
RSCEVVINRHNLPLVTTSDHNKNQMLPLTEKDRKRERHCNQEKKHKRSSKKHEERKEKKK
KHRERHENTSLSSSSSSSSSSSSCSSRRHKEGKSHKEKRGHVDSQQKELWEKDREGEKKK
RKEEGGEKEEWVCRNKEKGSKSGSSSVDNASSSPALGSADFQKLKALTDGPPKELKIRLI
KVESGDRETFIASEVEEKRIPLEEITIKNTASEIIRSCRAARIKRKFKESYLHPTLSVKP
VLSMEHPIPREKLNPPTPSIYLESKRDAFSPVLLQFCTDPKNPITVIRGLAGSLRLNLGL
FSTKSLVEANAEHAVEVRTQVQQPADENWDPSGTGQIWPCESSRSHTTIAKYAQYQASSF
QESLQEEKGSDNEDYDDDGKKLDINSENTGSNSASSSSEQKPVGKIIKFGTNIDLSDPKR
WKAQLQELQKLPAFMRVSSSSNMLSHVGHTILGMNSVQLYMKVPGSRTPGHQENNNFCSV
NINIGPGDCEWFAVHDNYWGAISEICDKHGVDYLTGSWWPVLEDLYNANIPVYRFIQRPG
DLVWINAGAVHWVQAVGWCNNIAWNVGPLNGYQYQLALERFEWNEVKKVKSIVPMIHVSW
NVARTVKITDPDTYKMIRHCLLQSLKHIQILRDQLVAAGKKISYQSRVKDEPAYYCNECD
VEVFNLLFVTSESGSKKLYVVHCEDCARQRSPNLSNVVVLEQYRIEDLMNTYDTFSLASS
SR
NT seq 5949 nt   +upstreamnt  +downstreamnt
atgcatcacaccgcggaaaaatttggtgtgcgcagctcacgggaccccttacctctggat
ggaatcaaccggggaccatgggctcccatggctggtcatgcctggcctcctccctccagg
tgctcacctggtggtcaacctccgttcctccctcacctcccacccagtcacatgatgggg
ctaaatcatgcaagtaaattttacaacagtgggccactgggacgtggaggagaaaagctg
gacctacctcaggccttgttgccaggggtaaacagggatctccggatgcccccagcccct
ccccgaccatgggatccaattggtcagcattatgagccattgtccagtgaggaacatgcc
catttgcacaacggatacaactctggaccatctgcacatctcgcagcccgagccaatcag
ctgttaaagtttgccccccctccattgcaacatggatccaggcccatgcctccaatccca
gacttgtgggaacagtctcaacagcagaggcaaccaccacccccacctaggggaccttac
tcgcattctggccagttgaagcggcaagctccccctctggcagagcagtcggtcatccag
catacccctctttccctaaacaggcctaatgaggaccgtcccagcccaagcaagaaaaag
aggagttctgactccgaacagcaattgatgggcccccatcagtactcagggtcagtggca
ccttcactgcccttgctgcagcagtctctgttccaatatacccctctgccaaaacgggcg
gcaacttggaacccattagaacgcaaaatgggccgcagtgagtttaaggacttgcccaaa
caagacatgggtgactgcagttataagcagttcccgtcccccaaaccgccatccatttct
tcacctcccatcacttctgtgaggggctatgaacaaggtcctccacctcatccccataag
ccttctcattcaccacaatctctgggctcctcgtctcacaatgtccacatcaaccaaact
acattcccctttcctaacaacaaaccttctggtcagaacctgagagagcaccaggtcatt
cccacccacaaagtgcatccatctgggttgaggtctcctggcagccaggcacccctgcaa
cagctttcatcgtccctgactgatcgagattgccctatccccacaccagcacaccccacc
gccgtgccttacagccaccccaaattccagccccatccagggctggttcccaccaccagc
ccctgttccaacagtgggacacaagctgcagcggctcaatgcaaccctcataagccctgg
aggaaccagatcaaacatgataaccaggccacagaactggatccttatcgccatacagtg
gacgctcaggtttcctcttcatctctgcagcaacagcagagtagatctgggcaaaatcag
gataagtgcacctctaatgctcgggcaccagttatcacctccacagtgccatccgtggag
tcttcaggtcctccttgttctgtgggagtctatagtagtgtggacacaatgagctcagtg
ctctctactaacgtttcggtggccagcaccgttaaaagctggaagactgcacatgcgtca
gcgctagtctcaagccctaatctgattccatctgcacaaggtctccaaccccaggagtat
cagagagaccaatctggcatcgtaagccatccaaaccaccaaccgaccgcaaaaattcag
catcaggaaccccatctaccccaacagaggcaggacaaaccccattacagcccaaacgtg
tcctcagctccttcctctcttagctcagggtttcagagttcaggaaatactgtcatcacc
agcaaggccactgataacctcttgcaggctacacgttcaccccttcatcatgtacagcct
gcctcatccatcactgtgaacacagcccaacaacagtctgactctttgcatcgtgaactg
cctcaccaggcagccccagtcttatctcaggtgccacctgcccagtcatatcaaaggcca
tgtcttcaacccaccatctctagcccccagtctattgaggaagcactcaaaaagcttgat
gctgagcttcaggaccatatgcgagctgaagagaaaaggaaggagcaggagcaaaaggag
agaaaacacaacaaagtaagaaacaaaagaggaaatgaggcaactgagaatctggagagc
ttgctgtcaaatagtgctactgatccaccccctccatgcctgtctccagccattacacct
tccactatttcaccaccaacccagacatccccaccttttccctggctgagcaggggaggt
acacgtccactggcaccaggtgcaaatcccatagaaaggtctcgcccacctcctctcaca
cctcaaacagactatgcccgtgaaaaacagaggcagagagagcaatggaattcctcgatc
actcctacatcccagaatacctcagggatttccacatctatatattcatccaaaccaaca
gattctttaaataaaacgatacagacatcctcctgttcatccaatgtctctaccatgtta
aagagctctcagaacatccaggctgtgggttcagtatcaaaccctccaaacctgcgagaa
ccccccaaactctatcaggcctttcccagggacactctaccatcctcctcaccaaaagcc
acgagtctatctagtctccaaaagcagacaagtggtgggctgggtagtttaggcagcagt
accagtagctccagcggggattcagatagtgcccagtttgaggaggaaccatccgagctt
ttacctgatggtttggcaaacattatgaagatgttggatgagtccattaaaaaggaggag
gaactatattctggccccagtggtggtggacagcccgactcggagcttccattttctctc
acggtggcgcctgtaaagagttattcgtttgcccctgacctcatgcctgccttgaaacag
ccatcctcagaggagtactcaactgacacccatgctagtccacccgtcctgagtcgtcag
ggatctttggcatccccttgcagccgtacttcttctcttgaagaagaggaggacacacta
aaaatccttcaaaaatcggacagtactgtaagttctcaatctcaagatggtggtgttggc
atcacaggaagtagttatcgccatagtgatttggccaagctctatggactgtcagagaga
gtgaaaagtgagtctgaggaagaggaagaagcagaacaggaagatgaaacaacttcctgt
tctccaccacccatgaggcctcacctgcatcagactggtgtgaacatcatgtttaaaaac
ttagcctctatgctagacacccaaaagtatacctaccgaggaggaccatttggtcgacca
cctccctcagctgtgttaggagtgaagtactcctcatcactttcactgggcccagatatc
tgcagacagcagagcacttctcccacatcaggctcaaccaatcacccaggctttccaact
caacccttaaagaattctacctctaaacaaacccatccactctcaccttcaggatcgaca
cctgaaagaaaaggagatgctacagtctcccagtcagatctttctggctgtgaggaggaa
gaaggagtgagaaaggggctgatggatgaagaggattatagcattgtaaaggattctaca
gagaacaaaaggaagcccaagctcactacaatctcagaatcatcactagcagagctgggt
cgtagttgtgaggtggtaataaacagacacaaccttcctttagtgacgacatcagaccac
aataagaaccagatgctgcccttaactgagaaggacaggaagcgggagcggcattgtaac
caggaaaagaaacacaaacgcagtagcaaaaaacatgaggaaaggaaagagaaaaagaaa
aaacacagagaaagacacgaaaatacgtccctatcatcatcatcatcatcgtcctcttcc
tcctcgtcatgctcaagccgaaggcacaaggaaggcaaatcacacaaggagaaaaggggc
cacgtagacagtcagcaaaaggagctgtgggagaaagacagagaaggagagaaaaagaaa
aggaaagaggaaggaggagagaaagaggaatgggtatgccggaacaaagagaagggttca
aagtcaggaagttcttcagtagataatgcgtcttcttcacctgcattgggttctgcagac
ttccagaagttgaaggctctgacagatggcccacccaaagagctcaagattcggctgatt
aaagtggaaagtggagaccgagaaaccttcattgcctctgaagttgaagagaagagaatt
ccacttgaggagatcaccattaaaaacacagccagtgaaatcatcagatcatgcagggct
gcccgtattaagaggaaatttaaggagtcctatctacatccaacgttgtctgtgaaacct
gttctgtccatggagcacccgatcccacgggaaaagcttaaccctcccacacccagtatc
tatctggaaagcaagagggatgccttctctcctgtgctgcttcagttttgcacagacccc
aagaaccccatcaccgtcatcagaggactagcaggctctctaagactgaatttgggtctc
ttctccacaaagtcactggtcgaggcaaatgcagaacatgctgtggaggtccgaacccag
gtacagcagccagctgatgagaactgggatcccagtggtactggtcaaatctggccatgc
gagagcagccgatcccacaccacaatagccaagtatgcgcagtaccaggcctccagcttc
caagaaagcctacaggaggagaaaggtagtgataatgaagactatgatgatgatgggaag
aaactggacatcaactcagagaacacaggaagtaactccgcaagctccagctcagagcag
aaacctgtggggaaaataatcaaatttggtaccaacattgacctttctgatcccaagagg
tggaaggcccagttacaagagctgcagaagctgccagcattcatgcgtgtgtcctccagt
agcaatatgctcagtcatgtaggccacaccatcctaggcatgaactctgtacagctttac
atgaaggtccctggtagtcgcacaccaggtcaccaagagaataataatttctgctctgta
aacatcaacatcggtcctggagactgtgagtggtttgctgttcatgacaattactgggga
gccatcagcgaaatctgcgataagcacggagtggattatttaactggctcgtggtggccg
gtgttggaggatctctataacgccaatattccagtctaccgcttcatccagaggcctggg
gacttggtgtggatcaacgcaggcgctgtgcactgggtccaggctgtgggttggtgcaat
aacattgcatggaatgtgggtccactgaatgggtaccagtaccagttggctctggaaagg
tttgaatggaatgaggtgaagaaggtgaagtccatcgtgcccatgattcacgtttcttgg
aatgtggcccgcacagttaaaattacagaccctgacacttacaagatgataagacactgt
ctcctgcagtctctaaagcacattcaaattctgagagaccagctggtagctgcagggaag
aaaatctcttaccagagcagagtaaaggatgaaccagcgtactattgcaacgagtgtgat
gtggaggtttttaacctgctgtttgtgacgagtgagagtggcagtaagaagttgtacgtg
gtgcactgtgaggactgtgccaggcaacgcagccctaatctctccaatgtagtggtgctg
gaacaataccgtatcgaagacctgatgaatacctacgacaccttcagcttggcctccagc
tctcggtga

DBGET integrated database retrieval system