Clarias gariepinus (North African catfish): 128518410
Help
Entry
128518410 CDS
T10780
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128518410 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128518410 (bdnf)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Growth factors (RTK binding)
128518410 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
128518410
NCBI-ProteinID:
XP_053347468
LinkDB
All DBs
Position
3:7303333..7340080
Genome browser
AA seq
282 aa
AA seq
DB search
MIVFSPLTFCPFAFHLGSIRFHQVRRVMTILFLTMVISYFSCMRAAPMREVPGVVGGHRA
EGYLGAARGHGTPPSGGALPSLTDTFEQVIEELLEVEGEAAQGQGGGGPGSAATATADSK
DVDTYASRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSIS
QWVTAVDKKTAIDMSGQTVTVLEKVPVANGQLKQYFYETKCNPLGYTKEGCRGIDKRHYN
SQCRTTQSYVRALTMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttttcagccccctcaccttttgtcctttcgcgtttcatctcgggtcaattcgg
ttccaccaggtcagaagagtgatgaccatcctgttccttactatggttatttcatacttc
agttgcatgagagctgcgcccatgagagaggtgccgggcgttgtggggggccaccgagcc
gagggctacctgggggccgctcggggccacgggactccaccgagcgggggagcactgccc
tcgctcacggacacgttcgagcaggtgatcgaggagctactggaagtggagggggaggca
gcgcagggccagggaggggggggtcccggcagtgcagctacggccacggctgattcgaag
gacgtcgacacgtatgcgtcgcgcgtgatgatcagcaaccaagtgcctttggagccacct
ctgctctttctcttggaggaatacaaaaactacctggatgccgccaacatgtcgatgcgg
gtgcggcgccactcggacccggcgcggcgtggcgagctcagcgtgtgcgacagtattagc
cagtgggtgacggccgtggacaaaaagacggctatcgacatgtccggccagaccgtcacc
gtgctggagaaggtcccggtggccaatgggcagctgaagcaatacttttatgagaccaaa
tgcaacccgctgggttacacgaaggagggctgccgaggaatagacaagcggcactataac
tcgcaatgccggacaacccaatcgtacgtgcgagccctcaccatggatagcaaacggaag
atcggctggaggtttatacggatagacacttcgtgtgtatgcacattgaccattaagagg
gggagatag
DBGET
integrated database retrieval system
