Clarias gariepinus (North African catfish): 128518548
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Entry
128518548 CDS
T10780
Symbol
pdgfaa
Name
(RefSeq) platelet-derived growth factor alpha polypeptide a
KO
K04359
platelet-derived growth factor subunit A
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
cgar04020
Calcium signaling pathway
cgar04510
Focal adhesion
cgar04540
Gap junction
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128518548 (pdgfaa)
04020 Calcium signaling pathway
128518548 (pdgfaa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128518548 (pdgfaa)
04540 Gap junction
128518548 (pdgfaa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128518548 (pdgfaa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128518548 (pdgfaa)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128518548 (pdgfaa)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Growth factors (RTK binding)
128518548 (pdgfaa)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Growth factors/receptors
128518548 (pdgfaa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
Motif
Other DBs
NCBI-GeneID:
128518548
NCBI-ProteinID:
XP_053347680
LinkDB
All DBs
Position
3:42044928..42056423
Genome browser
AA seq
202 aa
AA seq
DB search
MRAALCCLLACCCCCFSVPHAAAAAATREASIPRELIERLSNSEIRTMSDLQRLLELHSA
ENEVVRETKWRYSKEHLDHNANLKGSYTRPRHKRSIEEAVPAACKTRTEVYEIPRSQVDP
TAANFLIWPPCVEVTRCSGCCNTSTMRCHAIKKHHRNVKVAKIEYVRRKPKLREVQVQLE
DHLECVCVSKHHTESRLHTDVR
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcgctctgctgcctcctcgcgtgctgctgctgctgcttctccgtgccgcac
gccgccgccgccgccgcaacccgggaggcgtcaattccccgagagctaatcgagagactg
tccaacagcgagatccgcaccatgagtgaccttcagcggcttctggagttacactctgca
gagaacgaggtggttcgggagactaaatggcgctacagcaaagaacatctcgaccacaac
gccaacctcaagggctcgtacacacgcccaagacacaagaggagtattgaggaagcagtt
ccagccgcatgcaagacgcgaacggaggtgtacgagatcccacgctctcaggtggaccct
acagcagcaaacttccttatatggccaccatgcgtggaggtgacacggtgctcgggctgc
tgcaacaccagtaccatgcgctgccatgcgatcaaaaaacaccaccggaatgtcaaggtg
gctaagatcgagtatgtgcgtcgcaaacccaagctgcgggaggtgcaggtgcagctggag
gatcatttggagtgtgtgtgcgtgtctaaacaccacacagagtcccgcttacacacagat
gtacggtga
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