Clarias gariepinus (North African catfish): 128518613
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Entry
128518613 CDS
T10780
Symbol
slc6a2
Name
(RefSeq) sodium-dependent noradrenaline transporter
KO
K05035
solute carrier family 6 (neurotransmitter transporter, noradrenalin) member 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128518613 (slc6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128518613 (slc6a2)
Transporters [BR:
cgar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128518613 (slc6a2)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128518613
NCBI-ProteinID:
XP_053347769
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Position
3:6039414..6064733
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AA seq
613 aa
AA seq
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MNVQVMPEHKLASVAPLKPYAVEKKDVELILVKERNGLQYTSSRTCTETPERETWGKKLD
FLLSVIGFAVDLANVWRFPYLCYKNGGGAFLIPYIMFLFIAGMPLFYMELALGQYNREGA
ATVWKICPVFKGVGYTVIIIALYVGFYYNVIIAWSLYYLFSSFTSELPWQHCNNTWNSPM
CKDPKLINGSSFLGNATYAKYKRTPAAEFYEREVLRIHESQGIHDLKEPRWELSLCLVVV
VFILYFSLWKGVKSSGKVVYITATMPYIVLLVLLIRGITLPGAMNGIRAYLHIDLNKLNN
PQVWIEAATQIFYSLGAGFGVLIAFASYNKFDNNCYRDALLTSTINCVTSFFSGFAIFSV
LGYMAHEHGVSIKEVATDGPGLVFIIYPEAISTLPGSTFFAIFFFIMLLTLGIDSSMGGM
EAVITGLTDDFKILKRNRKLFTFITAFGTFLVALLCITKGGIYVFTLLDHYAAGTSILFG
VLVEAIGVSWFYGVDRFSEDIERMMGFKPGLYWRLCWKFVSPIFLLVVVIASIVTDNNME
YEGYIFPSWATLLGWGIALSSMIFVPLYAIYKFLSLPGTFKQRIAYCITPEHEHHLVAEG
NVRQFKLKHWLAI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcaggtgatgcccgagcacaagctggcatcggtggcccctctgaagccgtac
gccgtggagaagaaggatgtggagctcatcctggtcaaagagcgcaacggcttgcagtac
acgagctcgcgcacgtgcaccgagacgccggagcgcgagacgtggggcaagaaactggac
ttcttgctctccgtcattggcttcgccgtggacctggccaacgtgtggaggttcccttat
ctgtgctacaaaaacggcggaggggcatttctgatcccgtacattatgttcctgttcatc
gcgggaatgccactgttttacatggaactggctttgggtcagtataacagagaaggggcg
gccactgtgtggaagatctgcccagttttcaaaggcgtaggttataccgtgatcatcata
gcattgtatgtgggcttctactacaacgtcattatagcatggtctctgtactacctgttc
tcctcattcacgagtgagctgccatggcagcactgtaacaacacatggaacagccccatg
tgcaaagaccccaagctcatcaatggctcctctttcctgggaaatgcgacctatgccaag
tacaagcggacacctgctgccgaattctatgaacgagaagtactgcgcatccatgagagt
caaggcatccatgacctgaaagaacctcgctgggagctgtcactttgcctcgtcgtggtt
gtctttattctctactttagcttgtggaagggagtaaagtcttctggaaaggtggtgtat
atcactgccaccatgccctatattgtacttctggtgctgctgatccgaggcatcacacta
ccaggtgctatgaatggaatccgtgcatacctccacattgacctcaataaactcaacaat
cctcaagtttggatagaagccgccacacagattttctactctcttggggcgggtttcggt
gtgcttatcgcctttgccagctacaataaatttgacaacaactgctatagggatgccctc
ctgaccagcactataaactgcgtcaccagtttcttctcagggtttgccatcttctcggtg
ctgggctacatggctcatgagcatggcgtcagcattaaggaagtggccacagatgggcct
gggcttgtgttcattatctacccggaggccatttccactctccctggttcgacgttcttt
gccatattcttcttcatcatgcttctaaccctaggcattgacagctctatgggtggcatg
gaagcagtcatcactggactcacagatgacttcaagatcctaaagagaaacaggaagctg
ttcaccttcatcacagcattcgggaccttccttgttgccttattgtgcattacaaaagga
gggatctatgtcttcaccttactggaccactatgccgcagggacatccattctttttggg
gttcttgtggaagccataggagtgtcttggttctatggggtggacagattcagtgaagac
attgaacggatgatgggcttcaagccaggactctactggaggctttgctggaagttcgtc
agtcctatttttctgctggttgtggtgattgccagcattgtcactgacaacaatatggaa
tatgaaggctatatctttcctagctgggcgaccttgttgggctggggcattgccctttct
tctatgatcttcgtaccactctatgctatctacaagttcctcagtttgccaggcaccttc
aagcagagaatagcatactgtattacaccagagcacgaacatcacctggtggcagaggga
aatgtcaggcagttcaagctcaaacattggcttgcgatctga
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