Clarias gariepinus (North African catfish): 128518772
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Entry
128518772 CDS
T10780
Symbol
ext1b
Name
(RefSeq) exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgar01100
Metabolic pathways
Module
cgar_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
128518772 (ext1b)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
128518772 (ext1b)
Glycosyltransferases [BR:
cgar01003
]
Glycan extension
O-Glycan
128518772 (ext1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
128518772
NCBI-ProteinID:
XP_053348011
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All DBs
Position
3:21897758..21986668
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AA seq
752 aa
AA seq
DB search
MQAKKRYLVSLLTGAFLLLLFYLAGVPVSPGARSRHDRRGHGHRRSEHQPPLLQQQHQQP
WPHFSDPLNSFSPWDQPDTDESNIHMSPRQKRDVHASVFKGKRCRMDSCFDFSLCRRSGF
KVYVYPQQKGEKISESYQNILATIENSRFYTSDPGQACVFVLSLDTLDRDQLSPQYVHNL
RAKVQSLPLWNDGRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTETFRPRFDVSI
PLFPKEHPKTGGERGFLKYNTIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNAEDVVL
LTTCKHGKDWQKHKDARCDRDNAEYDKYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAA
CVPVMLSNGWELPFSEVIDWNTGAVIGDERLLLQIPSTVRSIHQDKILALRQQTQFLWEA
YFSSVEKIVLTTLEIIQDRVLQHTSHSSVMWNTHPGGLFTLPQYSSYLGDFPFYYAGLGI
KPYPKFTAVIHAVTPLVSQSQPILKLLTSVAKSQYCAQIIVLWNCDKPLPAKHRWPATSV
PVVVIEGENKVMSSRFLPYESILTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPA
RSHFWDSNKERWGYTSKWTNDYSMVLTGAAIYHRYYHYLYTQFLPSSLKNMVDQLANCED
ILMNFLVSAVTKLPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGS
MPLVHSQMRLDPVLFKDQVSILRKKYREIERL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaagcgctacctggtttcgcttctcacgggcgccttcctgctgctgctc
ttttacctggcgggtgtcccggtgtctccgggcgcgaggagccggcatgatcgcagaggt
cacggccaccggcgctccgagcaccagccgccgctcctccagcagcagcaccagcagccc
tggccgcacttctcggaccctttaaactcgttcagcccgtgggaccaacccgacacggac
gagtccaacatccacatgtctcccaggcagaagcgcgacgtgcacgccagcgtgtttaaa
ggcaagcgctgccgcatggactcgtgcttcgacttctcgctgtgtcgccggagcggcttc
aaggtctacgtgtacccgcagcagaagggcgagaagatctccgagagctaccagaacatc
ctggctacgatcgagaactcgcgtttttacacgtccgacccgggccaggcgtgcgtcttc
gtgctgagcttggacacgttggaccgcgaccagctctccccgcagtacgtgcataacctg
cgcgccaaggtgcagagcctgccgctgtggaacgacggcaggaaccacctgatcttcaac
ttgtactcgggcacctggcccgactacaccgaggacctgggcttcgacatcggccaggcc
atgttagccaaggccagcatcagcacggagaccttccggccgcgcttcgacgtctccatc
ccgcttttccccaaggagcacccgaagaccggtggcgagaggggattcctcaagtacaac
accatcccaccctttcggaagtacatgctggtgtttaagggcaagaggtatctgaccggg
atcgggtcggacaccaggaacgctttatatcatgttcataacgcagaggatgtggttctg
ctgaccacatgtaaacacgggaaggactggcagaagcacaaggatgcgcgctgcgaccgg
gacaatgcggagtacgacaaatacgactaccgtgaaatgcttcacaactccaccttctgt
ctcgtgccccgaggacgaagattgggctcttttcgcttcctggaggcattgcaggcagcc
tgtgttcccgtcatgctaagtaacgggtgggagcttcccttctccgaggtcatcgactgg
aacacgggcgctgtgatcggagacgaaaggcttctcttgcagatcccctccacggtgcgc
tccatccatcaggataagatcttggctttgaggcagcagactcagttcctgtgggaggcc
tacttctcatcagtggagaagattgtacttaccaccctagaaatcattcaggaccgggtt
cttcagcacacctcacacagtagtgtcatgtggaacactcatccaggaggtctcttcacg
ctgccccagtactcctcatatctgggcgactttcctttctactacgccgggcttgggatc
aaaccgtaccctaagttcaccgcagtcatccacgctgtcaccccactggtgtctcagtct
cagcccattctcaagctcctgacatccgtggccaagtcccagtactgcgctcagattatc
gtattgtggaactgtgacaagcctttacctgccaagcaccgatggcccgccacgtccgtg
cctgtcgtagtcatcgagggagagaacaaggtgatgagcagccgttttctgccctatgag
agcatcctcactgatgctgtgctgagtctggatgaggacacggtgctctcaaccacagag
gtggattttgccttcacggtttggcaaagtttcccggagaggattgtgggataccctgcc
cgcagtcatttctgggacagtaataaggagcgctggggctacacatccaaatggaccaat
gattactccatggttctgactggggctgccatctaccacagatattaccattacctgtac
acccagttcctgcccagcagcctgaagaacatggtggatcagctcgctaactgcgaagac
atcctgatgaacttcttggtgtcggccgttacgaagctgccacccatcaaagtgacacag
aagaagcagtacaaggagaccatgatgggacagtcatcccgggcgtctcgctgggcagat
ccagaccacttcgcccagcgccagacctgcatgaacaaattcgccagctggtttggctct
atgcctctggtccattcgcaaatgaggctggatccggtcctgtttaaagaccaggtctct
atccttcgcaagaaatacagggaaatcgagcgtctctga
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