Clarias gariepinus (North African catfish): 128519489
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Entry
128519489 CDS
T10780
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128519489 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgar04054
]
128519489 (nod2)
Pattern recognition receptors [BR:
cgar04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128519489 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
CARD
LRR_6
NLRC4_HD2
WHD_NOD2
LRR_4
AAA_22
AAA_16
AAA_18
nSTAND_NTPase5
AAA_25
AAA_30
AAA_29
Sigma54_activat
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
128519489
NCBI-ProteinID:
XP_053349203
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All DBs
Position
3:4221567..4232214
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AA seq
982 aa
AA seq
DB search
MCAQQLVLRQRTELLGALCCGGTAEPLDSVLDLLLSWDVLVWEDYHNIQGSSKPICSKTR
ELLDLVYTKGDDACSLLLAAFNQVLPEAQKVGLCFGKVNPTQRDIKKTPTSACEALLIDR
PALVKKIRDHLDGVLDALVEAGCFTSQDCDEVQLPVYTPSQKARKLLDQVRFKGEGAANT
LLQDLQHIDTKPQCVNVEKQLSTECLTYQKKLHSSVAAQSYVLSTYGGTGRFSLDDIYTD
GLLEVVQSDRQVTAVGLQDVVGPVGTLNKEADTILVCGEAGTGKSTLLQRLHLLWARGTL
LTDVIMLFPFSCRKLNTEQKLLSLKELLFQHCCWPDQGQDEIFQFILDHPELVLFTFDGL
DEFRQSFTDEERHCCPTQQAPVHTLLFNLLQGTLMKGVKKVVTSRPQAVGLSLKQYLCKE
VLAKGFCPVGIDHFVRKHHNDATVATRVVEALKANTALLGLCHIPVFCWIISKCYKELLG
CGEGSPQTVTDVYLMVLKHFIQKRMTQKHRTLGKGWLQEHLEMVRRLGQLALEGLETSCY
IFTESNLLKCSITKQDLDLGFLIECKDLSDATDCKHFEFLHITMQCFFAAIYIVLNNNGN
CSAIQNLFQSQCKPPTAGSHNCLAHCMNPGAEDRNVAETPNLQITLEFVAGLLSQRYRSL
LVQSCPAVLLEKKSKQVMKCLSKGMQRHFKSIPPPVKGEKKSMHAMPGFVWLIKCIYEMQ
ESQIAKNAMARLEIEHLKLIYCNIGPVECTALAYVLRYLQNPVGIQLDFNSVGDVGLEQL
LPCLHICRSLYLRNNNISDEGIRKLVEKGVQCECFEKVALFNNKLTDDCTKHFARLLKAK
KSFLALRLGNNDITSQGAEQLAEGLRCNTSLKYLGLWGNKIGDKGAEALADALKDSTSLV
WLSLAYNRIGDAGAHALAELIKKSTTLLELWLSENRISRDGVEFLIKALKANPTVKEVWL
RGNNLSAEEVKELSERESRLIF
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcacagcagctggtgctaaggcagagaacagaactgttgggggcactgtgctgt
ggtggcaccgctgaacctttggattctgtgctggacctgctgctgtcatgggatgtcctt
gtttgggaagactaccacaacattcagggctcctccaaacccatctgctcaaaaactaga
gaacttctggacttggtgtacactaaaggagatgatgcatgcagcctgctgctggcagct
tttaatcaagtcttacccgaggcccagaaagttggactttgcttcgggaaagttaatcca
acccaaagggacatcaaaaagactcctacaagcgcctgtgaggctttgctgattgacaga
ccagcacttgtgaagaagattcgggatcatctcgacggggtgctggatgctctggtggaa
gctggttgctttacttcacaagactgtgatgaagtgcagttacccgtgtacacaccttcg
caaaaggccaggaagctgttagaccaagtgaggttcaaaggggagggagctgccaacact
ttactgcaagatctacagcacatagacaccaagccacaatgtgtcaacgtggaaaagcaa
ctctcgacagaatgcctcacctaccagaagaagctgcacagctctgttgccgctcagtca
tatgttctcagcacatatggtggaacaggaaggttttccctagatgatatctatactgat
ggcctcctagaagtggtgcaaagtgacagacaggttacagctgtggggctgcaagatgtg
gtgggtccagttgggactcttaataaggaagccgatacaatacttgtttgtggagaagca
ggtactggtaagagtaccttgctgcagcgactccacctactgtgggcccgaggtaccttg
ttgacagacgttatcatgctgttccctttcagttgccgtaaactgaatactgagcagaag
ctactctccttaaaagagctcctgttccagcactgctgctggccggaccagggtcaagat
gaaattttccagttcattcttgaccaccctgaactagtccttttcacctttgatgggctt
gatgagtttaggcagagcttcacagatgaagagcgtcattgttgccccacacagcaagca
cctgtacacactctgcttttcaacctgcttcagggtaccttaatgaaaggagtgaagaaa
gtggtaaccagcaggcctcaagcagtcggtctatctctgaagcagtatctctgcaaagaa
gtcctggccaagggtttctgtccggtgggaatcgaccactttgtaaggaaacaccacaat
gatgccactgttgctactagagttgtagaggcccttaaggctaacacagccctacttggg
ctttgccatattcctgtgttctgctggattatatcaaagtgttataaagagctacttggg
tgtggggaaggcagccctcagacggtcaccgatgtgtacctcatggttctgaaacatttc
atccagaagcgcatgacccagaaacacaggactttgggaaagggatggctacaggaacat
ctagagatggtgagaagactaggacagttggcactggaagggttggagacttcctgttac
attttcaccgagtcaaacttgctgaaatgtagcatcacgaaacaggaccttgatctgggc
ttccttatagagtgtaaagacctctcggacgctactgactgcaaacactttgagttcctg
catatcaccatgcagtgtttctttgctgctatatatattgttcttaacaacaatggcaac
tgctctgccatccaaaatctctttcagtctcagtgcaaaccccccacagctggtagtcac
aactgtcttgcacactgcatgaatcctggagctgaggaccggaatgtagcagagacccca
aacctgcagatcaccttggagtttgttgcaggacttttgtcccagcgctatcgcagtctc
cttgtacagtcttgtcctgctgtcttgctcgagaaaaagtccaagcaagtcatgaagtgt
ttgtccaagggtatgcagagacatttcaaatcaatccctccaccagtgaagggtgaaaag
aagagcatgcatgcaatgccgggttttgtgtggcttattaagtgcatctatgagatgcag
gaaagccagattgccaagaatgcaatggcaaggctagaaatagaacaccttaagttaata
tattgtaatattggaccagtggaatgcactgctctggcttatgtactcaggtacctgcag
aatcctgtcggtatacagctggacttcaactcagtgggggatgtaggattggaacaactc
ttgccatgtcttcacatctgtcgctccctctatttgaggaacaataacatatcagatgaa
ggaatacgcaagcttgttgagaaaggagtgcaatgcgagtgcttcgaaaaagtagcgctc
ttcaacaacaaattaacagatgactgcacaaagcattttgccaggctgcttaaggcaaag
aagagcttccttgcattaagacttggaaacaatgacatcacatcacagggggccgagcag
ctggcggaagggctgaggtgcaacacgtccctgaagtatctcgggctgtggggaaacaaa
atcggagacaaaggcgccgaggctttagctgatgcactgaaggacagcacctcgctggta
tggttaagcctggcgtataacaggataggtgatgcaggagcacatgccttagctgagctt
atcaagaaaagcacaacacttctggagctctggctgagcgaaaaccgcattagcagggac
ggagtggagtttctgatcaaggctctgaaagcgaaccctactgtaaaggaagtgtggttg
agaggaaataacctgagcgccgaggaggtaaaggaacttagcgagcgagaaagcagactc
atcttctaa
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