Clarias gariepinus (North African catfish): 128519636
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Entry
128519636 CDS
T10780
Name
(RefSeq) exostosin-1c
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cgar01100
Metabolic pathways
Module
cgar_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
128519636
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128519636
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
128519636
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
128519636
Glycosyltransferases [BR:
cgar01003
]
Glycan extension
O-Glycan
128519636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
128519636
NCBI-ProteinID:
XP_053349405
LinkDB
All DBs
Position
3:complement(21330133..21394639)
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AA seq
737 aa
AA seq
DB search
MQARKKYVLLGLCTCCWLLLFYWGGLHERLLGLVTHRRAEVLRPWPDWLDRALLPAYASH
AELQNGAGPGDSPVLRRQAWNSIYKDSRCRMETCFDFSRCHGRDGFRVYVYPPEKGDRVS
ESYRKILASVAESRYYTSDPREACLFVLGIDTLDRDQLSTQFVPNVDERIRGYPLWNDGR
NHVVFNLYSGTWPNYTEDLGFNIGQAILAKASLNTEHFRPGFDVSIPLFSKEHPQKGGER
GWLLRNTVPPKRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIISLTTCRHGKDWEKHK
DARCDHDNQEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWELPF
SDVIQWNQAVIEGDERLLLQVPSTVRAVGIDRVLALRQRTQMLWEAYFSSVDKIVLTTLE
IIKDRVYAHISRNKFMWNSLPGGLLVLPEYSIHLAHYPFYYLNLGVMPGQEFTAVIHATS
PLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPPPHRSKWPPMPVPLVVTDGRRKTSSR
FLPHVAIETEAVLSLDEDSVLLTSEINFAFHVWRSFPERIVGYPPRSHFWDPVKKIWGYT
SKWTNEYSIVLTGAAFYHRYYHYLFSHYLPPSLRALVDRSSNCEDILMNFLVSSVTHLPP
IKVAQRKQYKEMPSPQSTNMAPWANPEHFTQRQECINTFASWFGYMPLVHSQLRLDPVLF
KDHVSVLRKKYKDLERA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgcaagaagtatgtgctgctgggtctgtgtacgtgctgctggctgctgctg
ttctactggggcggcctacacgagcggctcctcggcctggtgacgcacaggagggccgag
gtgctgcgcccatggcctgactggttggaccgagcccttttaccagcgtacgccagccat
gcagagctgcagaacggagcagggcctggtgactcacctgtgctgcgacgccaggcctgg
aacagtatctataaggacagccggtgtcgaatggaaacgtgcttcgacttcagtcgctgt
catggacgcgacggctttcgcgtgtacgtatacccgcccgagaagggcgaccgcgtgtcg
gagagctaccgcaaaatcctggcctcggtggccgagtccagatactacacatcagaccca
cgcgaggcctgcctgttcgtgctgggcatcgacacactggaccgtgaccagctttcgacg
cagttcgtccccaacgtcgacgagcggatccgtggctacccgctctggaacgacggacgc
aaccatgtggtttttaatctgtactcaggcacctggccaaactacacggaggacctggga
tttaacataggccaggccatcctggcaaaggccagcctgaacacagagcacttccggccc
ggcttcgacgtctccattccattgttctcaaaagagcatccacagaaaggcggcgagcgt
ggctggttgttgcgcaacaccgtgccaccgaagcggaaatatttactcatgttcaagggg
aaacgctacctaacagggatcggttctgacacacggaacgcactgcatcatatccataac
ggcaaagacatcatatccttaacaacctgccgccacggcaaggactgggagaagcacaag
gatgctcgctgtgaccacgacaaccaggaatacgagaggttcgactatcaggagctgctc
cacaactccaccttctgcctggttcctcgtgggcggcgcttgggatccttccgtttcctc
gagtctttgcaggcggcctgtatcccagtgttgctcagcaacggttgggagttgcccttc
tctgatgtcatccagtggaaccaggcagttatcgagggagacgagaggttgctgcttcag
gtgccgtctaccgtgcgggcagtgggcatcgaccgggtgctggctctgagacagcgcacc
cagatgctttgggaggcctacttctcctcagtggacaagattgttctcaccactttagag
atcatcaaggacagagtgtatgcccacatctcaaggaacaagttcatgtggaattctctg
cctggaggtctgctggtgttgcccgaatactcaatccacctggcccattaccctttctac
tatctgaatctgggagtcatgcctggccaggaattcactgccgtcatccatgccacatct
ccgctggtttcccagtctcagccaattatgaagctcctgcaggtggtgtccaagtcgaaa
tattgctcacagattatcatcttgtggaacagcgagaagccgccccctcaccggagcaag
tggccgcccatgccagtgcccctcgtcgtcacagatggcagaaggaaaacgagcagccgg
ttcctgccacatgtcgcgattgagactgaagcggtgctcagccttgatgaagactcagtg
ctactgactagtgagatcaactttgcctttcatgtgtggcggagtttccctgagagaata
gtcgggtatccacccaggagtcatttctgggatccagtgaagaaaatctggggctacacc
tccaaatggacaaatgaatactcaatcgtgctgactggagcagccttctatcacaggtat
tatcattacctgttttctcattatctgcccccttcactacgggcattagtggaccgcagc
tcaaactgtgaggacatcctgatgaacttcttagtgtcctctgtgacccacctgccaccc
attaaagtggctcagaggaagcagtacaaagagatgccgagcccacagagcaccaacatg
gccccctgggcaaaccctgagcactttacccagagacaggagtgtataaacaccttcgct
agctggttcggctacatgcccctggtgcactcgcagctccgtctggaccctgttcttttt
aaggaccacgtatccgtcctgcgcaagaagtacaaggacctcgagcgtgcttga
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