Clarias gariepinus (North African catfish): 128520179
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Entry
128520179 CDS
T10780
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128520179
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cgar04050
]
128520179
Cytokine receptors [BR:
cgar04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
128520179
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GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
128520179
NCBI-ProteinID:
XP_053350262
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Position
4:1243003..1263803
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AA seq
410 aa
AA seq
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MRMSACDTPPRAAMRLRMFFVVSFAWAYHETPRYQHRDPVTSELLLCDQCPPGTAVERHC
TTDLPTVCAPCPELRFAEQWHWGESCQHCTPVCKERQFIKRECNATHNRLCECVQGYHLS
VEFCIPHSTCPPGFGVSELGSPESDTVCEKCPRGFFSSVASATESCVPHVDCSRLGMKTR
NPGTATQDAVCDRDPAIDCTRKHTDCHADITLCEEAMFQFLLSPPLASVDLLLESLPGRK
VDKRSMEPLKKKCSPEQQALYLLRLWREQNKDQGKLHSVIQGLNHCERKVSRCAGLKNVT
LEDLMVLMDSLPGEKVNEEAVRALALSCPTHRHVAQLLHLWKSRNAGWDLAKALSHSARQ
LRSQNAPKTLLRAIKRISRVINTSALRPYEKLLTGALRDASCFKAKPYND
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgagcgcgtgcgacacgccgccgcgggctgccatgagactccgcatgttcttt
gtcgtgtccttcgcctgggcttaccatgaaacccccaggtatcaacaccgtgaccctgtg
acctctgagctcctgctgtgtgatcaatgccccccgggtacagccgtggaacgtcactgc
acgacggacttgcccaccgtgtgcgccccgtgccccgagctgcgatttgccgagcagtgg
cactggggcgaaagctgccagcactgcacccctgtctgcaaggagagacagttcatcaag
cgggagtgtaatgccacacacaaccggctctgcgagtgtgtacagggataccacctcagc
gtggagttttgtataccacacagcacctgccctccggggtttggggtctccgaactcggt
tcccccgagagtgacacggtgtgtgagaagtgtccacggggctttttctccagcgtggcg
tcggccaccgagtcctgcgttcctcacgtagactgctcacggctgggcatgaagacacgg
aaccccggcactgccactcaggacgcggtgtgtgacagagaccccgccatcgactgtact
cgcaaacacaccgattgccacgccgacatcaccctgtgtgaagaggccatgttccagttc
ctgttatcgcctcctctcgcctcggtggatctcctgctggagagccttcctggccgtaaa
gtggacaagagaagcatggaaccgctgaagaagaagtgcagccccgagcagcaggccctg
tatctcctgcggctttggagagagcagaacaaggaccaggggaagctccacagcgttata
caaggtctgaaccactgtgagaggaaggtgtctcggtgtgccggtctgaagaacgtgacg
ctggaggacctgatggtgctgatggacagtctgcccggcgagaaggtgaacgaggaggct
gtacgggcgctggcgctctcctgccccacgcaccgccatgttgcgcagttactgcacctc
tggaagagccggaacgccggctgggacctggccaaagctctgagccacagcgcacggcag
ctgcgctctcagaacgcgccgaagaccctgctgcgcgcaatcaagcgcatcagtcgtgtc
attaacacctccgcactgcgaccgtacgaaaagctcctcaccggcgcactccgagacgca
tcgtgcttcaaagccaaaccgtataatgactga
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