Clarias gariepinus (North African catfish): 128520210
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Entry
128520210 CDS
T10780
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00310
Lysine degradation
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128520210 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128520210 (setdb1b)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
128520210 (setdb1b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128520210 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
128520210 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
Pre-SET
MBD
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
128520210
NCBI-ProteinID:
XP_053350306
LinkDB
All DBs
Position
4:11012085..11054180
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AA seq
1272 aa
AA seq
DB search
MPRLKRFRMRRKPINRRMAAMEVDTGLGSALDVELGPELEEELGVSLDELRKWIEEQVDS
SEVVALRKAQLAEMKNLVEEKEKDMASMDKLCSTASESVIQCEVLVKELYSNIGLEYRES
SSEDEGVGGGNASEVIEIDDEDDEDDDDDDDDDEDDDDDVIAVGCVVPPKNKTPVKDSLM
EASAALQRSTQQVQNLMQTPSKPTPSTAITPTKGLAPPSPSRGSMLNIPAVFMSSGPAHA
PTQPNPALKQDVMRLNMSILGKKRTKTWHRGTLIAINSVGSGFKYKVKFENKGKSLLSGN
HVAFDYHPTLERLYVGARVVAKYKDGNQVWLYAGIVAEMPNSKNRMRFLIFFDDGYASYV
ALPDLYPVCRPLQKTWEDIEDESCRDFIEEYITAYPNRPMVLLKPGQIIKTEWEGTWWRS
RVEEVDGSLVKMLFLDDKRSEWIYRGSTRLEPMFNLKMSTANNQEKKMAGQQRVRPNMGP
MRVKGPVVQYTSENNIPIRPAPTPPRPQLPAPPQPPQPPQPSQSSQPSQPSQPIRTTETQ
MAKKSTSPYVPAARQIVATDLQLKPVGILPQNTGSRLFFLQSGPVQNLTPIAPAPQTLQT
AIPAMPTMPTIPTIPTISTISPYASERVPQEPSYQAPNDRLFYMAHNCTPECLKRIRPTR
PNLHRGRNPLLTPLLYEFRRMTARRRLNRKMSFHVIYKSPCGLSLRNMAEIQRYLFQTHC
DFIFLEMFCLDPYVLVDRRFQPQRPFYFIRDITGGREDIPLSCVNEIDNTPPPSVAYSKE
RTPEDGVFINTSSDFLVGCDCTDGCQDKSKCSCHQLTLQATGCTPGGQINPNAGYNYKRL
DECLPTGIYECNKRCRCNPQMCNNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVC
IYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRVK
MSSSQQGKNGPKTEERNTSSKGQDSSEEGESDDEKDDSNGDESDSSDDTFVKDTYYSSSS
VWRSYTTRRQAKGMKEESQDSKDGLSMSAGGSEDRKPPPVPEECGKSKVASWLTSQSSST
GAPNTKIEGGIKIEKKEVMTLSDSDDVQTISSGSDDNKERAKKTQAVVKRQVAVKSTRGI
ALKSSHGMMVKTGGGGGGGSAANQGHGGGTGDSNSRSTRQFFDGEESCYIIDAKLEGNLG
RYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLC
CCGSTECRGRLL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggctgaagagattccggatgcggcggaagccaataaacagaagaatggcagca
atggaagtggacacaggtttgggttcggctctggatgtagagctgggacccgagctggag
gaggagctcggcgtttctctggacgagctacgcaagtggatcgaggagcaggtggacagc
agcgaggtcgtagcactcaggaaggcgcagttagcagaaatgaagaacttggtcgaggag
aaagagaaggacatggctagtatggacaaactctgctccaccgcatcagagtctgtaata
cagtgtgaagttctagtgaaagagctgtacagtaacataggcctggagtatcgggagagc
agctccgaagatgaaggagtaggtggcggcaacgcttcagaggtcattgaaatcgatgac
gaggatgacgaggatgacgacgatgacgatgatgacgacgaggacgacgatgatgacgtc
attgccgtgggctgtgtggttccaccaaagaacaaaacaccagtcaaagattcgctcatg
gaagcgtcggcggcgctacagagatccactcagcaggtgcagaacctgatgcagacaccc
agcaaaccaacgccgtccacagccatcacgcccaccaaaggactggctcctccctctcca
tcccgcggctccatgctaaacattccagcagtcttcatgtcctcaggccctgcacacgca
cctactcaacccaatccagctctaaagcaggatgtcatgaggttaaacatgagcatcctg
ggtaaaaaacgcaccaagacctggcaccgtggaactctgatcgctattaactcagtgggc
agcggctttaagtacaaggtgaagtttgagaataaggggaaaagcctgttgtctgggaac
cacgtggcattcgactatcaccccacactggagaggctctacgtcggcgctcgtgtcgtt
gccaaatataaagatggcaaccaggtgtggctgtacgccggcatcgttgctgaaatgccc
aacagcaaaaaccgcatgaggttcctgattttttttgatgatggctatgcttcttacgta
gctttgccggatctctaccctgtttgcagacccttgcagaagacgtgggaagacattgag
gatgagtcatgcagggatttcattgaggagtacatcacggcatatccgaacagacccatg
gtgctgctgaagccgggtcagatcatcaaaacggagtgggaagggacgtggtggaggagc
cgcgtggaggaagtggacggcagcctcgtcaaaatgctgtttctggacgataagcgcagt
gagtggatctatcgtggctcaactcgcctggagcctatgttcaacctaaaaatgagcacg
gccaacaaccaggaaaaaaagatggcaggccagcagcgcgtgcgtcctaacatgggacct
atgagggttaaaggccctgtggtgcagtatacaagtgaaaacaatatacctatccgtcct
gcacctactccaccccgcccacagcttcctgctcccccccagcccccacagcctccccag
ccttcccagtcctcccagccgtcccagccctcccagcccatccgcacaactgagactcag
atggctaagaagagcacgtcaccgtacgtccctgcagctcgtcagattgttgccactgac
ctccagctcaaacccgtcggcatcctcccccaaaacaccggctccagactcttcttcctg
cagtcagggccagtgcagaacctgacacccatcgctccggctccccaaaccttgcagact
gccatacctgccatgcccactatgcccactatacccacaatacccacaatatctacgatc
tctccatatgcgagtgagcgggtacctcaggagccgtcatatcaggcccctaatgatcgc
ctcttctatatggcgcacaactgcacacccgagtgtctaaagcgcatccggcccacgcga
cccaacctccaccggggcagaaacccgctcctcaccccgttgctgtatgaattccgccgc
atgaccgcacgtcgccggctcaaccgcaagatgtccttccacgtgatctacaagtccccg
tgtggcctgagcctgaggaacatggcggagatccagcgctacctcttccaaacccactgc
gactttatcttcctagagatgttctgtctggacccgtatgtcctggtggaccgccgcttc
caaccccaaaggccgttttacttcatccgggacatcacaggtggacgtgaggacattccg
ctgtcctgcgtcaatgagatcgacaacacaccgccacccagcgtggcttacagcaaagag
cgcaccccagaggacggagtcttcatcaacacgagctccgacttcctggtgggctgtgac
tgcaccgacggctgccaggacaagtcaaagtgttcgtgccaccagctgacgctgcaggcg
acagggtgtactcctggcggacaaatcaatcccaatgctggatacaattacaagcgactg
gacgagtgcttacccactgggatatacgagtgtaacaagcggtgccgctgtaatcctcag
atgtgcaacaaccgcttggtgcagcacggcctccaagtgcgcctgcagctcttcaagact
cagaacaagggctggggcatccgctgtcttgatgacgtggccaaaggctcttttgtctgc
atctatgctgggaaaattcttacggacgactttgcggacaaggagggtttggaaatgggc
gacgagtactttgctaacctggaccatatcgagagcgtggagaactttaaagagggctac
gagagcgaggcacactgctcggacagcgagggcagcggtgttgacatgagccgggtcaaa
atgtcttcgtcccagcagggcaaaaatggccccaagacagaggagcgcaacacgagcagc
aaaggccaagactcttctgaagaaggcgagagcgatgacgaaaaagacgattcaaacggt
gatgagagcgatagctcggacgacacttttgtgaaggacacttactattcctccagctcg
gtgtggaggagctacacgactcgccgacaggccaagggcatgaaggaagagagtcaggat
agtaaggatggactgagcatgtcagctggaggatcagaggacaggaagccgccacctgtg
ccagaggaatgtgggaagagtaaagtggcctcatggctgaccagccagtcctcttccact
ggagcaccaaataccaaaatagaaggagggataaagatagagaagaaggaagtgatgacg
ctctctgacagcgacgatgtgcaaactatcagctctggctctgatgacaacaaagagcgt
gcaaagaagactcaggcggtggtgaagaggcaggtggcagtgaaatcaacacgaggcatc
gctttaaagtcctcacatggcatgatggtgaaaacaggaggtggtggaggagggggctca
gcagccaaccagggtcacgggggtggtaccggagacagcaattctagaagcacacggcag
ttctttgatggagaggagtcatgttacatcattgatgccaaactggaaggcaaccttgga
cgttatctcaatcatagctgcagtcctaacctgttcgtccagaatgtgtttgtggatact
catgacttgcgatttccatgggtggccttcttcgccagcaagaggatccgtgcaggaacg
gagctgacgtgggattataactatgaggttggcagcgtggaaggaaaagagcttctctgc
tgctgtggttccaccgagtgcagaggacgactgctctaa
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integrated database retrieval system
